Genetics – Wikipedia, the free encyclopedia

This article is about the general scientific term. For the scientific journal, see Genetics (journal).

Genetics (from Ancient Greek genetikos, "genitive" and that from genesis, "origin"),[1][2][3] a discipline of biology, is the science of genes, heredity, and variation in living organisms.[4][5]

Genetics is the process of trait inheritance from parents to offspring, including the molecular structure and function of genes, gene behavior in the context of a cell or organism (e.g. dominance and epigenetics), gene distribution, and variation and change in populations (such as through Genome-Wide Association Studies). Given that genes are universal to living organisms, genetics can be applied to the study of all living systems; including bacteria, plants, animals, and humans. The observation that living things inherit traits from their parents has been used since prehistoric times to improve crop plants and animals through selective breeding.[6] The modern science of genetics, seeking to understand this process, began with the work of Gregor Mendel in the mid-19th century.[7]

Mendel observed that organisms inherit traits by way of discrete 'units of inheritance.' This term, still used today, is a somewhat ambiguous definition of a gene. A more modern working definition of a gene is a portion (or sequence) of DNA that codes for a known cellular function. This portion of DNA is variable, it may be small or large, have a few subregions or many subregions. The word 'Gene' refers to portions of DNA that are required for a single cellular process or single function, more than the word refers to a single tangible item. A quick idiom that is often used (but not always true) is 'one gene, one protein' meaning a singular gene codes for a singular protein type in a cell. Another analogy is that a 'gene' is like a 'sentence' and 'nucleotides' are like 'letters'. A series of nucleotides can be put together without forming a gene (non-coding regions of DNA), like a string of letters can be put together without forming a sentence (babble). Nonetheless, all sentences must have letters, like all genes must have a nucleotides.

The sequence of nucleotides in a gene is read and translated by a cell to produce a chain of amino acids which in turn spontaneously fold into proteins. The order of amino acids in a protein corresponds to the order of nucleotides in the gene. This relationship between nucleotide sequence and amino acid sequence is known as the genetic code. The amino acids in a protein determine how it folds into its unique three-dimensional shape; a structure that is ultimately responsible for the proteins function. Proteins carry out many of the functions needed for cells to live. A change to the DNA in a gene can change a protein's amino acid sequence, thereby changing its shape and function, rendering the protein ineffective or even malignant (see: sickle cell anemia). When a gene change occurs, it is referred to as a mutation.

Although genetics plays a large role in the appearance and behavior of organisms, it is a combination of genetics with the organisms' experiences (aka. environment) that determines the ultimate outcome. Genes may be activated or inactivated, which is determined by a cell's or organism's environment, intracellularly and/or extracellularly. For example, while genes play a role in determining an organism's size, the nutrition and health it experiences after inception also have a large effect.

Although the science of genetics began with the applied and theoretical work of Gregor Mendel in the mid-19th century, other theories of inheritance preceded Mendel. A popular theory during Mendel's time was the concept of blending inheritance: the idea that individuals inherit a smooth blend of traits from their parents.[8] Mendel's work provided examples where traits were definitely not blended after hybridization, showing that traits are produced by combinations of distinct genes rather than a continuous blend. Blending of traits in the progeny is now explained by the action of multiple genes with quantitative effects. Another theory that had some support at that time was the inheritance of acquired characteristics: the belief that individuals inherit traits strengthened by their parents. This theory (commonly associated with Jean-Baptiste Lamarck) is now known to be wrongthe experiences of individuals do not affect the genes they pass to their children,[9] although evidence in the field of epigenetics has revived some aspects of Lamarck's theory.[10] Other theories included the pangenesis of Charles Darwin (which had both acquired and inherited aspects) and Francis Galton's reformulation of pangenesis as both particulate and inherited.[11]

Modern genetics started with Gregor Johann Mendel, a German-Czech Augustinian monk and scientist who studied the nature of inheritance in plants. In his paper "Versuche ber Pflanzenhybriden" ("Experiments on Plant Hybridization"), presented in 1865 to the Naturforschender Verein (Society for Research in Nature) in Brnn, Mendel traced the inheritance patterns of certain traits in pea plants and described them mathematically.[12] Although this pattern of inheritance could only be observed for a few traits, Mendel's work suggested that heredity was particulate, not acquired, and that the inheritance patterns of many traits could be explained through simple rules and ratios.

The importance of Mendel's work did not gain wide understanding until the 1890s, after his death, when other scientists working on similar problems re-discovered his research. William Bateson, a proponent of Mendel's work, coined the word genetics in 1905.[13][14] (The adjective genetic, derived from the Greek word genesis, "origin", predates the noun and was first used in a biological sense in 1860.)[15] Bateson popularized the usage of the word genetics to describe the study of inheritance in his inaugural address to the Third International Conference on Plant Hybridization in London, England, in 1906.[16]

After the rediscovery of Mendel's work, scientists tried to determine which molecules in the cell were responsible for inheritance. In 1911, Thomas Hunt Morgan argued that genes are on chromosomes, based on observations of a sex-linked white eye mutation in fruit flies.[17] In 1913, his student Alfred Sturtevant used the phenomenon of genetic linkage to show that genes are arranged linearly on the chromosome.[18]

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Genetics - Wikipedia, the free encyclopedia

Stress reaction gene linked to death, heart attacks

PUBLIC RELEASE DATE:

18-Dec-2013

Contact: Sarah Avery sarah.avery@duke.edu 919-660-1306 Duke University Medical Center

DURHAM, N.C. A genetic trait known to make some people especially sensitive to stress also appears to be responsible for a 38 percent increased risk of heart attack or death in patients with heart disease, scientists at Duke Medicine report.

The finding outlines a new biological explanation for why many people are predisposed to cardiovascular disease and death, and suggests that behavior modification and drug therapies could reduce deaths and disability from heart attacks.

The study appears in the Dec. 18, 2013, issue of the journal PLOS ONE.

"We've heard a lot about personalized medicine in cancer, but in cardiovascular disease we are not nearly as far along in finding the genetic variants that identify people at higher risk," said senior author Redford B. Williams Jr., M.D. director of the Behavioral Medicine Research Center at Duke University School of Medicine. "Here we have a paradigm for the move toward personalized medicine in cardiovascular disease."

Williams and colleagues built on previous work at Duke and elsewhere that identified a variation in a DNA sequence, known as a single nucleotide polymorphism (SNP), where one letter in the genetic code is swapped for another to change the gene's function. The SNP the Duke team focused on occurs on the gene that makes a serotonin receptor, and causes a hyperactive reaction to stress.

In a study published last year, the researchers reported that men with this genetic variant had twice as much cortisol in their blood when exposed to stress, compared to men without the genetic variant. Known as a "stress hormone," cortisol is produced in the adrenal gland to support the body's biological response when reacting to a situation that causes negative emotions.

"It is known that cortisol has effects on the body's metabolism, on inflammation and various other biological functions, that could play a role in increasing the risk of cardiovascular disease," said lead author Beverly H. Brummett, Ph.D., associate professor of Psychiatry and Behavioral Sciences at Duke. "It has been shown that high cortisol levels are predictive of increased heart disease risk. So we wanted to examine this more closely."

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Stress reaction gene linked to death, heart attacks

How cells remodel after UV radiation

PUBLIC RELEASE DATE:

19-Dec-2013

Contact: Scott LaFee slafee@ucsd.edu 619-543-6163 University of California - San Diego

Researchers at the University of California, San Diego School of Medicine, with colleagues in The Netherlands and United Kingdom, have produced the first map detailing the network of genetic interactions underlying the cellular response to ultraviolet (UV) radiation.

The researchers say their study establishes a new method and resource for exploring in greater detail how cells are damaged by UV radiation and how they repair themselves. UV damage is one route to malignancy, especially in skin cancer, and understanding the underlying repair pathways will better help scientists to understand what goes wrong in such cancers.

The findings will be published in the December 26, 2013 issue of Cell Reports.

Principal investigator Trey Ideker, PhD, division chief of genetics in the UC San Diego School of Medicine and a professor in the UC San Diego Departments of Medicine and Bioengineering, and colleagues mapped 89 UV-induced functional interactions among 62 protein complexes. The interactions were culled from a larger measurement of more than 45,000 double mutants, the deletion of two separate genes, before and after different doses of UV radiation.

Specifically, they identified interactive links to the cell's chromatin structure remodeling (RSC) complex, a grouping of protein subunits that remodel chromatin the combination of DNA and proteins that make up a cell's nucleus during cell mitosis or division. "We show that RSC is recruited to places on genes or DNA sequences where UV damage has occurred and that it helps facilitate efficient repair by promoting nucleosome remodeling," said Ideker.

The process of repairing DNA damage caused by UV radiation and other sources, such as chemicals and other mutagens, is both simple and complicated. DNA-distorting lesions are detected by a cellular mechanism called the nucleotide excision repair (NER) pathway. The lesion is excised; the gap filled with new genetic material copied from an intact DNA strand by special enzymes; and the remaining nick sealed by another specialized enzyme.

However, NER does not work in isolation; rather it coordinates with other biological mechanisms, including RSC.

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How cells remodel after UV radiation

Stress gene linked to heart attack – Study

A stress gene has been linked to having a higher risk of dying from a heart attack or heart disease.

Heart patients with the genetic change had a 38 per cent increased risk of heart attack or death, say US researchers.

Personalised medicine may lead to better targeting of psychological or drug treatment to those most at risk, they report in PLOS ONE.

The study adds to evidence stress may directly increase heart disease risk, says the British Heart Foundation.

A team at Duke University School of Medicine studied a single DNA letter change in the human genome, which has been linked to being more vulnerable to the effects of stress.

They found heart patients with the genetic change had a 38 per cent increased risk of heart attack or death from heart disease after seven years of follow up compared with those without, even after taking into account factors like age, obesity and smoking.

This suggests that stress management techniques and drug therapies could reduce deaths and disability from heart attacks, they say.

director of the Behavioural Medicine Research Center at Duke University School of Medicine, Dr Redford Williams, said the work is the first step towards finding genetic variants that identify people at higher risk of cardiovascular disease.

This is one step towards the day when we will be able to identify people on the basis of this genotype who are at higher risk of developing heart disease in the first place, he told BBC News.

Thats a step in the direction of personalised medicine for cardiovascular disease.

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Stress gene linked to heart attack – Study

Common disorders: It’s not the genes themselves, but how they are controlled

PUBLIC RELEASE DATE:

20-Dec-2013

Contact: Jessica Studeny jessica.studeny@case.edu 216-368-4692 Case Western Reserve University

Many rare disorders are caused by gene mutation, like sickle cell anemia. Yet until now the underlying genetic cause of more common conditions for example, rheumatoid arthritis has evaded scientists for years.

New research from Case Western Reserve University School of Medicine to appear in the journal Genome Research finds that six common diseases arise from DNA changes located outside genes. The study from the laboratory of Peter Scacheri, PhD, shows that multiple DNA changes, or variants, work in concert to affect genes, leading to autoimmune diseases including rheumatoid arthritis, Crohn's disease, celiac disease, multiple sclerosis, lupus and colitis. Further, for each disease, multiple different genes are manipulated by several small differences in DNA.

"We've known that rare diseases are due to one change within one gene with major effects. The key take away is that common diseases are due to many changes with small effects on a handful of genes," said Scacheri, associate professor of genetics and genome sciences.

The research is in advanced online publication and can be found at http://tinyurl.com/okml3ag.

The human genome includes 3 billion letters of DNA. Only 1 to 2 percent of the letters are used as the blueprint for proteins, the body's building blocks. Scacheri's team is part of group of scientists investigating where and why DNA goes awry in the remaining 98 percent the regions between genes. These regions contain thousands of genetic switches that control the levels of genes. This new finding shows that in common diseases, the fine-tuning of those switches is not quite right, leading to incorrect expression of some key genes previously unidentified.

"This is a paradigm shift for the field with respect to pinpointing the genetic causes of common disease susceptibility," Scacheri said.

"The Scacheri lab's study provides a new model for understanding how genetic variants explain variation in common, complex diseases such as rheumatoid arthritis and colitis. That is, the effect of an individual variant may be very small, but when coupled with other nearby variants, the manifestations are much greater, said Anthony Wynshaw-Boris, MD, PhD, chair of the Department of Genetics and Genome Sciences at Case Western Reserve University School of Medicine and University Hospitals Case Medical Center and the James H. Jewell MD '34 Professor of Genetics at the School of Medicine. "This model may also help to explain why genetic studies of these and other common diseases have so far fallen short of providing a satisfactory explanation of the genetic pathways important for the development of these disorders."

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Common disorders: It's not the genes themselves, but how they are controlled

How cells remodel after exposure to UV radiation

Researchers at the University of California, San Diego School of Medicine, with colleagues in The Netherlands and United Kingdom, have produced the first map detailing the network of genetic interactions underlying the cellular response to ultraviolet (UV) radiation.

The researchers say their study establishes a new method and resource for exploring in greater detail how cells are damaged by UV radiation and how they repair themselves. UV damage is one route to malignancy, especially in skin cancer, and understanding the underlying repair pathways will better help scientists to understand what goes wrong in such cancers.

The findings will be published in the December 26, 2013 issue of Cell Reports.

Principal investigator Trey Ideker, PhD, division chief of genetics in the UC San Diego School of Medicine and a professor in the UC San Diego Departments of Medicine and Bioengineering, and colleagues mapped 89 UV-induced functional interactions among 62 protein complexes. The interactions were culled from a larger measurement of more than 45,000 double mutants, the deletion of two separate genes, before and after different doses of UV radiation.

Specifically, they identified interactive links to the cell's chromatin structure remodeling (RSC) complex, a grouping of protein subunits that remodel chromatin the combination of DNA and proteins that make up a cell's nucleus during cell mitosis or division. "We show that RSC is recruited to places on genes or DNA sequences where UV damage has occurred and that it helps facilitate efficient repair by promoting nucleosome remodeling," said Ideker.

The process of repairing DNA damage caused by UV radiation and other sources, such as chemicals and other mutagens, is both simple and complicated. DNA-distorting lesions are detected by a cellular mechanism called the nucleotide excision repair (NER) pathway. The lesion is excised; the gap filled with new genetic material copied from an intact DNA strand by special enzymes; and the remaining nick sealed by another specialized enzyme.

However, NER does not work in isolation; rather it coordinates with other biological mechanisms, including RSC.

"DNA isn't free-floating in the cell, but is packaged into a tight structure called chromatin, which is DNA wound around proteins," said Rohith Srivas, PhD, a former research scientist in Ideker's lab and the study's first author. "In order for repair factors to fix DNA damage, they need access to naked DNA. This is where chromatin remodelers come in: In theory, they can be recruited to the DNA, open it up and allow repair factors to do their job."

Rohith said that other scientists have previously identified complexes that perform this role following UV damage. "Our results are novel because they show RSC is connected to both UV damage pathways: transcription coupled repair - which acts on parts of DNA being expressed - and global genome repair, which acts everywhere. All previous remodelers were linked only to global genome repair."

The scientists noted that the degree of genetic rewiring correlates with the dose of UV. Reparative interactions were observed at distinct low or high doses of UV, but not both. While genetic interactions at higher doses is not surprising, the authors said, the findings suggest low-dose UV radiation prompts specific interactions as well.

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How cells remodel after exposure to UV radiation

Stress Gene Linked To Higher Risk Of Heart Attack And Death

Rebekah Eliason for redOrbit.com Your Universe Online

A new study from Duke reveals that the genetic trait responsible for predisposing some people to strong stress reactions may also cause the risk of heart attack or death to rise by 38 percent.

This discovery provides a new biological explanation for why some people are inclined towards cardiovascular disease. Since in these cases the disease is linked to stress, the findings suggest that behavior modification and drug therapies targeting stress reduction may lower heart attack related disability and deaths.

Redford B. Williams Jr., M.D., director of the Behavioral Medicine Research Center at Duke University School of Medicine and senior author of the paper, said, Weve heard a lot about personalized medicine in cancer, but in cardiovascular disease we are not nearly as far along in finding the genetic variants that identify people at higher risk. Here we have a paradigm for the move toward personalized medicine in cardiovascular disease.

Building on previous work at Duke and elsewhere, Williams and his colleagues were able to identify a variation in a DNA sequence known as single nucleotide polymorphism (SNP). In this sequence variation, one letter from the genetic code is swapped with another causing a change in the genes function. Specifically the team focused on the SNP occurring on the gene responsible for making a serotonin receptor that causes a hyperactive reaction to stress.

Last year, a study was published reporting that men with the genetic variation were found to contain twice as much cortisol in their blood after exposure to stress than men without the variant. Commonly known as the stress hormone, cortisol is designed to support the bodys biological response to stressful situations that cause negative emotions. This vital hormone is produced in the adrenal glands.

Beverly H. Brummett, PhD, associate professor of Psychiatry and Behavioral Sciences at Duke and lead author of the paper, said, It is known that cortisol has effects on the bodys metabolism, on inflammation and various other biological functions, that could play a role in increasing the risk of cardiovascular disease. It has been shown that high cortisol levels are predictive of increased heart disease risk. So we wanted to examine this more closely.

Several years of data from heart catheterization patients at Duke was formed into a large database used by researchers to run a genetic analysis of over 6,100 white participants. Of those studied, two-thirds were men and one-third was women. Approximately 13 percent of the group was found to possess the genetic variation for the overactive stress response.

Those found to carry the genetic variation corresponded with patients who had the highest rates of heart attacks and deaths when evaluating the median follow-up time of six years. Even when taking into account age, obesity, smoking history, other illnesses and the severity of their heartdisease, the studied genetic trait was found to be associated with a 38 percent increased risk of heart attack and death.

This finding requires independent replication and evaluation in a more diverse population, said Peter Kaufmann, Ph.D., deputy branch chief of the Clinical Applications and Prevention Branch at the NIHs National, Heart, Lung, and Blood Institute (NHLBI). This research may one day help to identify patients who should be candidates for more intensive disease prevention and treatment strategies.

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Stress Gene Linked To Higher Risk Of Heart Attack And Death

OMICS Group Incorporation Acquires Journal of Molecular and Genetic Medicine from LibPubMedia

OMICS Group Incorporation Acquires Journal of Molecular and Genetic Medicine from LibPubMedia

OMICS Group Incorporation announces acquisition of Journal of Molecular and Genetic Medicine (JMGM) from the Library Publishing Media.

The deal was signed between Dr. Srinu Babu Gedela, CEO, OMICS Group Inc., and Dr. Muhammad Sohail, CEO, Library Publishing Media. Both organizations are working together to strengthen bonds for long-term future relationship.

Journal of Molecular and Genetic Medicine (JMGM) offers its scholarly publishing to PubMed and PubMed Central. The journal stands as one of its own kind by publishing high quality articles and exploring the vast discipline of Genetics and Molecular Biology. Started in 2005, it fosters communication between academic research and interdisciplinary commerce of medicine. Burgeoning the Open Access publishing, JMGM enumerates OMICSs vision of dissemination of scientific and healthcare knowledge.

Journal of Molecular and Genetic Medicine (JMGM) will particularly focus on biomedical issues of the developing world, centralizing research on malaria, HIV/AIDS, viral hepatitis and microbial diseases. OMICS Group like its other publishings will continue using peculiar Peer-review methodologies and using Editorial Manager System for the same.

JMGM is available online and freely accessible over the internet under the running Open Access Policy of OMICS Group. Dr. Muhammad Sohail continues to be the Editor in Chief of the respective journal and offer his timely presence and attention for amplifying this collaboration.

I am extremely happy and delighted to have JMGM join OMICS family wherein the journal will add value to our readers and I am confident that it is not very far that I can abolish the knowledge barriers, says Dr. Srinu Babu Gedela.

More about OMICS Group Incorporation: OMICS Group Inc. was founded in 2007, by Dr. Srinu Babu Gedela. With a vision of making healthcare and scientific information Open Access, OMICS hosts more than 300 journals under its vast umbrella. To support the scientific information and vice versa, OMICS organizes around 100 conferences worldwide each year. With more than 22,000 editorial board members being a structural backbone of the organization, OMICS is running on a path of continuous evolution since then. OMICS has started new initiatives: SciTechnol, E-Books, Scholars Central, Clinical and Expert Database, Biosafety Protocols, and E-BABE.

More about Library Publishing Media: Library Publishing Media was started in 2005 by Dr. Muhammad Sohail. Being an Open Access Publisher LibPubMedia Ltd hosts two Open Access and Peer-reviewed journals excluding JMGM: Journal of Venom research and Journal of RNAi and Gene Silencing. To support various scientific information published under their syndicate, they organize conferences in Oxford University with the idea and objective of strengthening communication between the eminent scientists, academic researchers and business conglomerates.

Contact To learn more about this merger, please contact- Name: John Benson Email: contact.omics@omicsonline.org

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OMICS Group Incorporation Acquires Journal of Molecular and Genetic Medicine from LibPubMedia

Genetic medicine unit now seeing 800 new cases a year in bid to prevent inherited cancers

Genetic medicine unit now seeing 800 new cases a year in bid to prevent inherited cancers

6:00am Thursday 16th May 2013 in News By Barry Nelson, Health Editor

A GENETIC medicine expert has revealed that a regional breast and ovarian cancer prevention unit set up nearly a decade ago is now seeing 800 new referrals a year.

Dr Paul Brennan, director of the Northern Genetic Service, said referrals of women who have an increased risk of inherited breast or ovarian cancer had steadily increased since the service was established at James Cook University Hospital in Middlesbrough in 2004.

"It was a trickle at first but we are now getting 800 new referrals a year of women with a family history of mainly breast, ovarian and colon cancer," said Dr Brennan, who also works at the International Centre for Life in Newcastle.

Following the admission by actress Angelina Jolie that she has had a double mastectomy to reduce her chances of breast cancer, Dr Brennan said he now expected an increase in the number of North-East women with a family history of breast and ovarian cancer being referred to the Northern Genetic Service.

"When we started the cancer family history service on Teesside in 2004 we didnt know how many patients would be referred. I would have thought that after ten years we would have seen a decline but they are still coming in," he added.

"With around 500 referrals for a family history of breast cancer, this suggests that there are still many families out there."

Using the latest genetic science, specialists can track down family members who are at risk from inherited forms of cancer.

In the most extreme cases, for example where a woman may have a 50 per cent chance of inheriting breast cancer, patients may be advised to have their breasts removed to prevent cancer.

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Genetic medicine unit now seeing 800 new cases a year in bid to prevent inherited cancers

Immune System Changes May Drive Aggressiveness of Recurrent Tumors

The traditional view of recurrent tumors is that they are resistant to therapy because they've acquired additional genetic mutations that make them more aggressive and impervious to drugs. Now, however, researchers at the Perelman School of Medicine at the University of Pennsylvania show in an animal model that the enhanced aggressiveness of recurrent tumors may be due to changes in the body's ...

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Immune System Changes May Drive Aggressiveness of Recurrent Tumors

Genetic Variations Cause Diabetes

Researchers have discovered three uncommon genetic variants that influence the production of insulin. The finding, published in the journal Nature Genetics, could help uncover the genetic factors that cause diabetes. Diabetes is a disease which occurs when someone has very high blood sugar levels due to the pancreas not producing enough insulin or the bodies cells not responding to insulin ...

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Genetic Variations Cause Diabetes

Hundreds Of Genetic Mutations Linked To Autism

There are literally hundreds of mutated genes associated with autism spectrum disorder (ASD), researchers from the Seaver Autism Center at Icahn School of Medicine at Mount Sinai reported in the journal Neuron. The scientists explained that genomic technology has completely transformed gene discovery and the understanding of autism. A technology called HTS (high-throughput sequencing) has ...

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Hundreds Of Genetic Mutations Linked To Autism

3 new genetic links to colorectal cancer

( Vanderbilt University Medical Center ) Vanderbilt-Ingram Cancer Center investigators have identified three new genetic "hotspots" linked to colorectal cancer. These variants, reported Dec. 23 in an Advanced Online Publication in Nature Genetics, provide new insight into the biology of colorectal cancer -- and could represent new therapeutic targets for the disease.

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3 new genetic links to colorectal cancer

Genetic clues to insulin production: Genomic analysis method helps track genetic contributors relevant to diabetes

A cutting-edge genomic analysis method has helped researchers track new genetic contributors relevant to diabetes. The results provide a first example that the new tool can help decipher many complex diseases such as obesity and cancer.

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Genetic clues to insulin production: Genomic analysis method helps track genetic contributors relevant to diabetes