Google tool helps in chemistry work

Published: Feb. 14, 2012 at 2:57 PM

PULLMAN, Wash., Feb. 14 (UPI) -- A U.S. researcher says technology Google uses to rank trillions of Web pages can help scientists study how molecules are shaped and organized.

Aurora Clark, a professor of chemistry at Washington State University, has adapted Google's PageRank software to create moleculaRnetworks, software to help determine molecular shapes and chemical reactions without the expense, logistics and occasional danger of lab experiments, a WSU release reported Monday.

Google's PageRank software uses a mathematical algorithm to measure and rank the relevance of various Web pages to a user's search, and Clark and her colleagues realized interactions between molecules are a lot like links between Web pages; some links between some molecules will be stronger and more likely than others.

"What's most cool about this work is we can take technology from a totally separate realm of science, computer science, and apply it to understanding our natural world," Clark said.

Just as PageRank is effective at looking at massive amounts of Web data at once, moleculeRnetworks can quickly characterize the interactions of millions of molecules and help researchers predict how various chemicals will react with one another, the researchers said.

"Computational chemistry is becoming the third leg in the stool of chemistry," the other two being experimental and analytical chemistry, Clark said.

"You can call it the ultimate green chemistry. We don't produce any waste. No one gets exposed to anything harmful."

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Google tool helps in chemistry work

Sirona Biochem Appoints Three Chemistry Experts to Subsidiary Scientific Advisory Board

VANCOUVER, BRITISH COLUMBIA--(Marketwire -02/14/12)- Sirona Biochem Corp. (TSX-V: SBM.V - News)(Pinksheets: SRBCF.PK - News)(Frankfurt: ZSB.F - News), a biotechnology company specializing in carbohydrate chemistry technology, announced today it has appointed organic chemistry expert Professor Pierre Vogel, fluorine chemistry expert Dr. Bernard Langlois and carbohydrate chemistry expert Dr. Eric Leclerc to the Scientific Advisory Board of its subsidiary, TFChem.

"These respected chemists will bring a tremendous amount of scientific insight to our research efforts," said Dr. Howard Verrico, President and CEO of Sirona Biochem. "This expertise will help to streamline our processes in compound development, selection and formulation and give us a better understanding of the compounds' commercial relevance," Dr. Howard Verrico added.

Biography of Professor Pierre Vogel

Dr. Pierre Vogel has been a Professor of Organic Chemistry at the Ecole Polytechnique Federale de Lausanne, Switzerland since 2001. In 1969, he completed his Ph.D under the supervision of Prof. H. Prinzbach at the Institute of Organic Chemistry, University of Lausanne. Dr. Vogel spent two years at Yale University, New Haven, Connecticut, USA with Prof. Martin Saunders, Prof. J. A. Berson, K. A. Wiberg and P.v.R. Schleyer (Princeton Universtiy). He then worked as a Research chemist at Syntex S.A., in Mexico with Prof. P.Crabbe before returning to the University of Lausanne in 1973. As of 1977 he became Professor of organic chemistry at the University of Lausanne. In 1991 he was Vice-Chairman of the Institute of organic Chemistry, University of Lausanne until 2001. He was also a part-time graduate school teacher at the Universities of Rouen and Caen from 1991 to 1993 and part-time professor at Ecole Polytechnique de Palaiseau from 1993-2000. Dr. Vogel has authored over 520 publications in referred journals.

Biography of Dr. Bernard Langlois

Dr. Bernard Langlois is a scientific expert in the area of organic fluorine chemistry with more than 40 years of academic experience. Until recently, he was the Director of the SERCOF laboratory at the University of Lyon in France as well as the Research Director for CNRS at the Universite de Claude Bernard. D. Langlois has been involved in organic fluorine chemistry since 1970, when he joined the research team of the Rhone-Poulenc Co. His interest is directed to all aspects of organic fluorine chemistry; aromatic and aliphatic compounds, fluorination and trifluoromethylation techniques, as well as functionalization of fluorinated substrates. During his career, he developed new methods for performing radical perfluoroalkylation using "Halons" or sodium trifluoromethanesulfinate, mild nucleophilic trifluoromethylation with fluoral hemiaminals or hydroxytrifluoroacetamides, as well as nucleophilic trifluoromethoxylation. He was also involved in work on a new route to triflic acid from bromotrifluoromethane. Dr. Langlois is the author of more than 90 articles, 9 book chapters, 33 patents, 60 poster presentations, 69 oral presentations and 39 invited and plenary lectures in national and international events. Dr. Langlois received his PhD from the University of Lyon (France).

Biography of Dr. Eric Leclerc

Dr. Eric Leclerc is currently a Centre Nationale de la Recherche Scientifique (CNRS) Researcher at the Institut Charles Gerhardt in France. In this role, Dr. Leclerc is responsible for the development of new tools for the synthesis of fluoroolefins and metabolically stable, fluorinated glycomimetics as analogues of glycoconjugate with high therapeutic potential. Prior to this role he was a Researcher at the Institut National des Sciences Appliquees (INSA) de Rouen, also in France, where he was responsible for the development of fluorinated glycomimetics and synthesis of chiral ligands for asymmetric catalysis. Previous positions include a post-doctoral role at the University of Hawaii at Manoa and a PhD position at the Universite Pierre et Marie Currie. Dr. Leclerc has authored more than 20 publications and has given several presentations in the area of fluorinated glycomimetics. He received his PhD and Masters in organic chemistry from the Universite Pierre et Marie Currie in 2001 and 1997, respectively.

About Sirona Biochem Corp.

Sirona Biochem is a biotechnology company developing diabetes therapeutics, cancer vaccine antigens, skin depigmenting and anti-aging cosmeceuticals and biological ingredients. We are applying a proprietary chemistry technique to improve the pharmaceutical properties of our carbohydrate-based molecules. For more information visit http://www.sironabiochem.com.

Sirona Biochem cautions you that statements included in this press release that are not a description of historical facts may be forward-looking statements. Forward-looking statements are only predictions based upon current expectations and involve known and unknown risks and uncertainties. You are cautioned not to place undue reliance on these forward-looking statements, which speak only as of the date of release of the relevant information, unless explicitly stated otherwise. Actual results, performance or achievement could differ materially from those expressed in, or implied by, Sirona Biochem's forward-looking statements due to the risks and uncertainties inherent in Sirona Biochem's business including, without limitation, statements about: the progress and timing of its clinical trials; difficulties or delays in development, testing, obtaining regulatory approval, producing and marketing its products; unexpected adverse side effects or inadequate therapeutic efficacy of its products that could delay or prevent product development or commercialization; the scope and validity of patent protection for its products; competition from other pharmaceutical or biotechnology companies; and its ability to obtain additional financing to support its operations. Sirona Biochem does not assume any obligation to update any forward-looking statements except as required by law.

Neither TSX Venture Exchange nor its Regulation Services Provider (as that term is defined in policies of the TSX Venture Exchange) accepts responsibility for the adequacy or accuracy of this release.

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Sirona Biochem Appoints Three Chemistry Experts to Subsidiary Scientific Advisory Board

It’s the chemistry: Love makes the brain stay strong, scientist says

OTTAWA — Whoever said people in love have good chemistry hit the bull’s-eye without even knowing the whole story.

At Carleton University, neuroscientist Hymie Anisman is opening up the brain’s secrets to show how the chemicals of love (and friendship) make us healthier.

The mere physical presence of someone you trust can support you at stressful times, Anisman says.

“Under most conditions, social support is very, very effective.

“And in a love relationship, (this protection) will be stronger. You’re counting on that person you love to be supportive.”

Love helps our brains remain healthy. But why does it work?

More and more, the scientific investigation of love is turning to a human hormone called oxytocin. It’s involved in everything from bonding with a newborn baby to adult love and friendship, and even simple trust.

Anisman has a Canada Research Chair in neuroscience, and one of his major areas of study is stress.

“We also know that when oxytocin levels are high, we’re less responsive to stressors,” he said. The hormone helps us build social networks and support, and also to cope with stresses. The stress is still there, but we deal with it better.

“So in a nice relationship, you have the oxytocin that’s elevated as part of the love that a person has for another (person). But also, above and beyond these affects of oxytocin, social support is an incredible way of dealing with stress.”

Having a loved one nearby distracts us from problems. It helps us find solutions by asking for help. Even when all that fails, it helps us vent: “Yell, scream, cry, whatever, but get it out. Even if the problem isn’t solved, sometimes venting and praying are all you’ve got left.”

In the long run, he says, having social support from friends or lovers prevents overload on the brain circuits that can result in mental illness such as depression.

“Love is important for all ages, especially if you’re elderly.”

While humans have know for thousands of years that love and simple affection are helpful, the research world has been buzzing with new discoveries related to oxytocin for the past few years.

Now research is focusing on whether the hormone can be given as an inhaled drug to help people reduce social anxiety — to mimic the support of friends.

When that news became public, marketers were quick to offer inhalers on the Internet. But the small print showed they contain no oxytocin, as this isn’t approved for commercial use.

Anisman’s work is funded by the Canadian Institutes of Health Research and the Natural Sciences and Engineering Research Council.

© Copyright (c) The Ottawa Citizen

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It’s the chemistry: Love makes the brain stay strong, scientist says

Chemistry teachers: Request a free chemistry activity kit from ACS

The following is an e-mail I received from the ACS Kids & Chemistry Program Manager. I’m re-posting it here to spread the word. If you know any chemistry school teachers who might benefit from this program, please forward them the relevant info.

With the support of a grant from the National Science Foundation and the National Institutes of Health, the American Chemical Society has developed a science activity kit for teachers to use with their students. This kit, titled Chemistry: Investigating your World, is being mailed to teachers who request it and meet the following criteria:

•               They plan to use the kit with a minimum of twelve 4th-8th grade students.
•               They request that the kit be sent to a school address within the continental United States.

Do you know a teacher who should know about this free chemistry kit?

If so, please forward the information below.

Request a FREE Science Activity Kit to celebrate the International Year of Chemistry 2011!

Although it’s now 2012, Chemistry: Investigating Your World kits are still available.  The kit is designed with enough materials for multiple classes of 12 to 32 students, working in groups of 4. The activities, reading level, and content are appropriate for students in fourth through eighth grades.

Request a kit at www.acs.org/iyckit.

Using the lessons in the kit, students will see demonstrations and do hands-on activities while investigating clues of chemical change, including:

·         Production of a gas
·         Formation of a precipitate
·         Color Change
·         Change in temperature

Check out the four lessons to find out how meeting scientists around the world, investigating clues of chemical change, and real-life applications make learning chemistry relevant and fun. Then be sure to request your free kit as soon as possible. Supplies are limited!

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Chemistry teachers: Request a free chemistry activity kit from ACS

Pacific Biosciences Releases Next Generation Chemistry and Software for PacBio® RS DNA Sequencing System

MENLO PARK, Calif.--(BUSINESS WIRE)--

Pacific Biosciences of California, Inc. (NASDAQ: PACB - News), provider of Single Molecule Real Time (SMRT®) sequencing products, today announced it has released a major upgrade to its PacBio®RS system, referred to as “C2”, including new chemistry, enhanced SMRT Cells and upgraded software, which together provide customers with significant performance increases for DNA sequencing. The company and numerous customers will discuss their progress with the platform through a total of 50 presentations and posters at the 2012 Advances in Genome Biology & Technology (AGBT) meeting this week in Marco Island, Fla.

The PacBio RS is a revolutionary DNA sequencing system that reveals new biological insights by incorporating novel, single molecule sequencing techniques, advanced analytics, and long read lengths. Compared with the C1 versions launched with the system in April 2011, the PacBio C2 chemistry and software provide approximately:

2x increase in average read length; 3-4x improvement in mappable data per SMRT Cell; 50-80% reduction in input DNA required; and Consensus accuracy of Q50 (99.999%) at substantially lower coverage.

“The changes we’ve made with this upgrade enable significant performance increases and lay the foundation for ongoing enhancements to the PacBio RS,” said Mike Hunkapiller, Ph.D., Chairman and CEO of Pacific Biosciences. “We’re very proud of how far we’ve come in the nine months since we first released the product commercially, and even more proud of our customers’ achievements, many of which will be highlighted this week at AGBT.”

The Wellcome Trust Sanger Institute and The Institute for Genome Sciences (IGS) at the University of Maryland School of Medicine are among the institutions that had early access to a preliminary version of the new chemistry.

“The Sanger Institute has seen significant improvements in performance compared to C1, enhancing our research projects in the areas of de novo genome assembly, sequencing through repetitive elements, enabling coverage of regions with extreme base composition, and improving genome assemblies,” said Harold Swerdlow, Ph.D., Head of Research and Development at the Wellcome Trust Sanger Institute.

Luke Tallon, Scientific Director of the Genomics Resource Center at IGS added: “Early access to the new chemistry has resulted in significantly improved read lengths compared to the original C1 chemistry. These longer reads have enhanced our de novo genome assembly of microbial genomes when combined with short-read data. The longer read lengths have also increased our ability to generate higher-accuracy circular consensus reads.”

The latest generation of SMRT Cells is more robust due to an improved manufacturing process, and the PacBio RS software has been enhanced for improved reliability and greater performance. To date, Pacific Biosciences has developed two whole product solutions that leverage the capabilities of the PacBio RS system to uniquely enable key customer applications: 1) de novo whole genome assembly and 2) targeted sequencing. As an example, the SMRT Analysis software incorporates The Genome Analysis Toolkit (GATK) developed by the Broad Institute. This provides a streamlined pipeline for variant analysis for targeted sequencing.

This week’s AGBT conference will feature a total of 35 presentations and posters from PacBio customers, largely highlighting the two key applications for the system. Scientists from PacBio will also present a total of 15 presentations and posters about the technology. Details are available at http://www.pacb.com/agbt2012.

For more information about Pacific Biosciences, please visit http://www.pacb.com. You can also follow the company on Twitter http://www.twitter.com/pacbio.

About Pacific Biosciences, Inc.

Pacific Biosciences’ mission is to transform the way humankind acquires, processes and interprets data from living systems through the design, development and commercialization of innovative tools for biological research. The company has developed a novel approach to studying the synthesis and regulation of DNA, RNA and proteins. Combining recent advances in nanofabrication, biochemistry, molecular biology, surface chemistry and optics, Pacific Biosciences has created a powerful technology platform called single molecule, real-time, or SMRT®, technology. SMRT technology enables real-time analysis of biomolecules with single molecule resolution, which has the potential to transform the understanding of biological systems by providing a window into these systems that has not previously been open for scientific study.

Forward-Looking Statements

This press release contains forward-looking statements. Forward-looking statements may contain words such as "believe," "may," "estimate," "anticipate," "continue," "intend," "expect," "plan," the negative of these terms, or other similar expressions, and include the assumptions that underlie such statements. Such statements include, but are not limited to, statements regarding the Company’s SMRT technology. These statements are subject to known and unknown risks and uncertainties that could cause actual results to differ materially from those expressed or implied by such statements, including but not limited to risks discussed from time to time in documents Pacific Biosciences of California, Inc. has filed with the Securities and Exchange Commission, including the risks identified under the section captioned "Risk Factors" in its recently filed Quarterly Report on Form 10-Q. All forward-looking statements are based on estimates, projections and assumptions as of the date hereof. Pacific Biosciences undertakes no obligation to update any forward-looking statements.

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Pacific Biosciences Releases Next Generation Chemistry and Software for PacBio® RS DNA Sequencing System

Molecular carpet: Startling results in synthetic chemistry

ScienceDaily (Feb. 13, 2012) — Swiss scientists have created a minor sensation in synthetic chemistry. The team of scientists from ETH Zurich and Empa, the Swiss Federal Laboratories for Materials Science and Technology, succeeded for the first time in producing regularly ordered planar polymers that form a kind of "molecular carpet" on a nanometer scale.

Back in 1920 at ETH Zurich, the chemist Hermann Staudinger postulated the existence of macromolecules consisting of many identical modules strung together like a chain. His concept was initially greeted with mockery and incomprehension from his fellow chemists. But Staudinger was to be proved right (and eventually even awarded the Nobel Prize in Chemistry in 1953): today the macromolecules described as polymers are known as plastics, and by 1950 one kilogram of them was already being produced per capita worldwide. Today, more than ninety years after Staudinger's discovery about 150 million tons of plastics are manufactured every year -- a gigantic industry delivering products that our daily lives can hardly do without. A research group led by ETH Zurich scientists A. Dieter Schlüter and Junji Sakamoto has now succeeded in making a decisive breakthrough in the synthetic chemistry of polymers: they have for the first time created two-dimensional polymers.

Polymers are formed when small single molecules known as monomers join together by chemical reactions like the links of a chain to form high molecular weight substances. The question remained as to whether polymers can only polymerize linearly, i.e. in one dimension. Although graphene counts as a naturally occurring representative of a two-dimensional polymer -- planar layers of carbon with a honeycomb-like pattern -- it cannot be synthesized in a controlled way. In order to develop a synthetic chemistry that generates two-dimensional molecules the ETH chemists had to first and foremost create oligofunctional monomers in such a way that they join together purely two-dimensionally instead of linearly or even three-dimensionally. Polymers of this kind must have three or more covalent bonds between the regularly repeating units. The scientists had to find out which bonding chemistry and environment was most suitable for producing this kind of "molecular carpet."

Light plus special building blocks equal a "molecular carpet"

They decided to do the synthesis in a single crystal, i.e. a crystal with a homogeneous layer lattice. PhD student Patrick Kissel successfully used this to crystallize special monomers in layered hexagonal single crystals. The monomers he generated are photochemically sensitive molecules, for which such an arrangement is energetically optimum. When irradiated with light with a wavelength of 470 nanometers, the monomers polymerized in all the layers of the crystal. To separate the individual layers from one another the researchers boiled the crystal in a suitable solvent. Each layer represents a two-dimensional polymer.

The fact that the team really had succeeded in producing sheet-like polymers with regular structures was shown by special studies in a transmission electron microscope (TEM) carried out by Empa researcher Rolf Erni and Marta Rossell from ETH Zurich (who meanwhile is also working at Empa's Electron Microscopy Center). "These two-dimensional polymers are extremely sensitive towards irradiation. It's really tricky to not destroy their structure during the TEM measurements, which made the analyses a real tough nut to crack," says Erni. Diffraction experiments at minus 196oC -- the condensation point of nitrogen -- and high-resolution images at a low electron dose allowed the Empa scientists to eventually provide proof that the cross-linked molecules indeed exhibit a regular two-dimensional structure.

Potential application: a molecular sieve

The polymerization method that was developed is so gentle that all the monomer's functional groups are also preserved at defined positions in the polymer. Says Sakamoto, "Our synthetically manufactured polymers are not conductive like graphene, but on the other hand we would be able to use them for example to filter the tiniest molecules." In fact in the regularly arranged polymers there are small defined holes with a diameter in the sub-nanometer range. Moreover, tiny hexagons in the polymers, formed by benzene rings with three ester groups, can be removed by a simple hydrolytic process. This would form a "sieve" with an ordered structure suitable for the selective filtration of molecules.

However, before the researchers can think about practical applications, the task now is to characterize the material's properties. First of all they must find a way to produce larger amounts and even larger sheet sizes. The size of the crystals is currently only 50 micrometers. Sakamoto stresses that "those, however, are already enormous degrees of polymerization at a molecular level."

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The above story is reprinted from materials provided by Empa (Swiss Federal Laboratories for Materials Science and Technology), via AlphaGalileo.

Note: Materials may be edited for content and length. For further information, please contact the source cited above.

Journal Reference:

Patrick Kissel, Rolf Erni, W. Bernd Schweizer, Marta D. Rossell, Benjamin T. King, Thomas Bauer, Stephan Götzinger, A. Dieter Schlüter, Junji Sakamoto. A two-dimensional polymer prepared by organic synthesis. Nature Chemistry, 2012; DOI: 10.1038/nchem.1265

Note: If no author is given, the source is cited instead.

Disclaimer: Views expressed in this article do not necessarily reflect those of ScienceDaily or its staff.

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Molecular carpet: Startling results in synthetic chemistry

Love: compatibility, chemistry part of it, but communication is the key

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Love: compatibility, chemistry part of it, but communication is the key

The Chemistry Club enlist expert trainers for master classes

The Chemistry Club, a leading independent group serving the technology sector, has today announced they will run a series of networking master classes. The course is set to launch later this year and has been co-created with leading industry trainers.

London (PRWEB UK) 9 February 2012

The one day Master Classes are aimed at senior executives and will help participants improve their networking skills. Taking the company’s founders own experiences in the networking field and with the help of specialist trainers, the company has created a thorough hands-on programme.

The Chemistry Club aims to cover every aspect of face-to-face networking as well as creating a simulated networking event to help delegates practice their new found skills. The master class will cover a wide range of topics including; learning how to prepare for events, combating nervousness, developing confidence in your ability to connect with people you don’t know, and how to start, sustain and finish conversations. Understanding how to make a lasting impression, how to present information about yourself and improving your self-projection will also be covered.

The master class will cost £1100 + VAT and to ensure all attendees gain maximum value from the programme classes sizes are kept to a minimum. Every individual who attends the class will receive a personal reference toolkit providing comprehensive networking information to refer to after the course.

About The Chemistry Club

The Chemistry Club is a leading group serving the technology sector. The company was established in 1999 and holds a series of special briefings, business-to-business events, executive coaching and networking master classes in the Central London area. The business run by Mark Simon is known for its networking events which have enabled people to meet and share their thoughts and experiences in a neutral environment.

###

Ross Hall
FTI Consulting
020 7269 9334
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The Chemistry Club enlist expert trainers for master classes

For Newman, good grade in chemistry difficult to maintain

Ryan Newman learned an awful lot about chemistry at Purdue. But the kind of chemistry that can make the minute differences between winning and losing a Sprint Cup race? That can't be found in any textbook that Newman owns.

Case in point: Teammate Tony Stewart was so frustrated with his performance heading into the 2011 Chase that he felt undeserving of a spot in it. But with victories at Chicagoland and New Hampshire, suddenly the chemistry between Stewart and crew chief Darian Grubb changed dramatically.

2011 statistics Newman's Chase differential First 26 Chase Wins 1 0 Top-fives 8 1 Top-10s 13 4 Avg. start 11.9 13.2 Avg. finish 13.1 18.4

And Newman is at a loss to explain it.

"If you look at Tony and Darian's relationship before the Chase, during the Chase and after the Chase, you would scratch your hair until you have no hair," Newman said during NASCAR's preseason media tour. "How that worked? I don't know. I don't know that it was supposed to, but it did.

"It's difficult from my perspective, when you have a great relationship with a guy like Tony Gibson, and all of a sudden, our performance falls down during the Chase. And these two guys -- who were struggling -- skyrocketed to the top in the first two races. It was like, 'What are we doing right that's wrong?'"

Newman points to those two races as not only the turning point in Stewart's season, but his own as well. Newman had recorded six top-10 finishes over a nine-race stretch heading into the Chase, and felt like he had as much momentum as any of the championship contenders.

But as much as the light bulb seemed to turn on for Stewart and Grubb, Newman said he and crew chief Gibson quickly found themselves groping in the dark for answers after the first two Chase races.

"I guess some of our struggles in a roundabout way were due to [Stewart's] success," Newman said. "He wins the first race in the Chase [on fuel mileage] after not winning any, and we run out of fuel and finish eighth. We go to the next race, win the pole, lead a bunch of laps and finish [25th], and he wins the race."

"That was the extra weight on our shoulders that kind of squashed us."

After missing the Chase in 2010, making it in 2011 should have left everyone on the No. 39 Chevrolet team with a positive feeling. But watching Stewart win the title -- while himself finishing a distant 10th in the points -- left Newman with mixed feelings.

When you have the opportunity to capitalize on your success and don't close the deal -- especially when your teammate does -- it can leave a bitter aftertaste.

"We definitely failed, from a team standpoint, in those 10 races," Newman said. "Our chemistry dissolved. We have to control that better. That's one of the things we have to fix for 2012, hands down.

"I feel like we've had some opportunities that have gotten away from us. I won't say we've given races away but we should have been in Victory Lane more often than we have been. Those are the things we need to fix.

"Those things go hand in hand," Newman said. "When you can't fix those things and you know that you should -- and are capable of doing it but you haven't -- that makes it really tough to swallow."

The goal for Newman this season is to try to regain that chemistry. But saying it and doing it are two separate things.

"Chemistry, you can't make it happen," Newman said. "It either happens or it doesn't. Going back to 2009, you look at Tony Stewart's first 26 races -- he was the hands-down favorite to win the Chase and he didn't. He clobbered everybody and didn't win. But he has a horrible first 26 [in 2011] and wins. Same guy, same people. There's something there and I don't know what it is."

What it isn't is a rift between Newman and Gibson. If anything, Newman said that relationship only grew stronger from the adversity the two faced at the end of last season.

Newman admitted the final 10 races last year "were a struggle." But he remains committed to making the changes necessary to make the relationship with Gibson work.

"Relationships in general are like marriages," Newman said. "We argue about the simple things that don't matter, because the big things that do matter -- we've already agreed on. That's why we got married. And that's the situation with myself and Tony Gibson.

"I understand that he knows what he's doing as a crew chief. I know what I'm doing as a driver. We understand what our goals are. But it might be the simple things -- the way he works something or the way he describes it in reference to what he's had in the past -- and those are the things, the small humps, you have to get through."

It there was a magic formula for team chemistry -- a list of properties that could guarantee success -- Newman would be the first in line to test the results. Until then, it's more a matter of field study rather than classroom lab work.

"I still say it's chemistry," Newman said. "I don't know, and that's the real thing that's so amazing.

"It'll be interesting to see how the first five, 10 races go with Tony and [his new crew chief, Steve Addington] versus me and Tony. ... Chad Knaus and Jimmie Johnson can talk about it a different way, and Jeff Gordon and Alan Gustafson can talk about it a different way. It all changes."

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For Newman, good grade in chemistry difficult to maintain

Mailbag 2/11: What’s With UConn’s ‘Chemistry?’

 

Q: Your thoughts on the teams lack of chemistry?  It seems to me that so so-called leader Shabazz is very much like Jerome Dyson was.  That team was pulled apart from within and it appears it is happening with this group.

Paul Ippedio

Saco, Me. (formerly of Manchester)

A: Hi  Paul. This comes up a lot, in fact Kevin Nathan and I talked a lot about chemistry on WTIC SportsTalk on Friday. I didn’t cover the Jerome Dyson teams so I can’t speak to that comparison.

I don’t think this team is being pulled apart from within, though, at least not from what I can see. There are different types of chemistry. One is working together, getting along, etc., and I think this team still has that. The other is the meshing of skill sets, and that’s where I think the problem is. Certain guys do certain things well, others not so well, and it doesn’t quite fit together. For instance, Alex Oriakhi is good at certain things that he may not be able to do with Andre Drummond also on the court. The team likes to run, but guys don’t take and make good shots in transition. Shabazz Napier likes to throw certain types of passes that guys can’t catch. … And so on. It’s a reason, I suppose, we have seen so many different combinations. This type of chemistry is much harder to fix, but it does happen sometimes. At some point things could just click, fall into place, and the chemistry on the court and bench will look a lot different. But 23 games into the season, it’s getting late to expect that to happen. At Syracuse today, we’ll see.

 

 

 

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Mailbag 2/11: What’s With UConn’s ‘Chemistry?’

For China and U.S., Better Living Through Better Leaders’ Chemistry: View

Editorials

Photographs by Joshua Roberts/Bloomberg, Nelson Ching/Bloomberg; Illustration by Bloomberg View

By the Editors Mon Feb 13 00:00:41 GMT 2012

Don’t expect any breakthrough deals from this week’s meeting between the U.S. president and China (CNGDPYOY)’s leader-in-waiting. In an election year for Barack Obama and Xi Jinping, who is in line to replace President Hu Jintao this fall, the best outcome to hope for is good chemistry.

Given the tensions in the air, that can hardly be assured. Consider Republican presidential candidate Mitt Romney’s stump bluster about how, on his “first day in office,” he will impose tariffs on any Chinese goods that benefit from “unfair trade practices.” Or the more than five dozen pieces of legislation introduced in Congress in 2011 that took up Chinese behavior on everything from rare earth mining to exports of American flags. President Obama himself has occasionally shown a weakness for tough talk. Vice President Xi also has made a few brusque pronouncements on “foreigners with full bellies.”

The feel-good visits planned for Xi to California and Iowa offer one way to rise above such acrimony. For Americans in particular, the latter trip can be instructive. In 1985, Xi visited Iowa when he was a provincial leader in Hebei to honor a sister-state relationship, touring farms and baseball fields and sharing views at the Rotary Club. Then, Xi was eager to learn modern farming techniques. Now, Iowa does roadshows to China to hawk its goods as U.S. growth wanes. Nor is Hebei the backwater it was back then; its economy is bigger than Hong Kong’s. Barring a serious crisis, China’s economy may be bigger than America’s in 10 years.

China’s tremendous economic growth over the 27 years since Xi’s Iowa trip has been a signal human achievement, lifting hundreds of millions of Chinese out of poverty, and enabling billions of consumers around the world to enjoy a higher standard of living. That dynamism continues, and with it the added double-edged benefit of Chinese savings still underwriting U.S. profligacy.

Today, the U.S. and China share an enormous and widening array of interests, such as maintaining peace on the Korean peninsula, reducing greenhouse-gas emissions and preventing a global financial meltdown. Just as the U.S. has sometimes seemed oblivious to the enormous internal challenges that China faces, so, too, China has resented or willfully ignored the reality of the new responsibilities that it must shoulder.

The immediate task before Obama and Xi is to build a relationship that will enable their countries to bridge that perceptions gap. In that process, we imagine that Obama can turn the harsh rhetoric of the Republican candidates to his advantage -- something that must make former China hand George H.W. Bush spin in his parachute. Moreover, the situations in Iran and Syria, not to mention recent abductions and killings of Chinese workers in Egypt, Sudan and Thailand, are forcing the Chinese to re-examine their precepts about non-intervention, the importance of upholding global norms and their own relative inability to shape the situation on the ground. All those things can contribute to a convergence of views.

The good news is that Xi, 58, seems better suited to relationship-building than China’s current president. He’s regarded as more affable and spontaneous. And his worldview is colored by his years living in coastal provinces like Zhejiang, home to some of China’s most successful entrepreneurs, such as Zong Qinghou, a soft-drink merchant, and Li Shufu, founder of automaker Geely International Corp. Many of the province’s business owners pride themselves on succeeding without government help, a dynamic China could use more of. Given Xi’s background, for example, he should know China is imperiling its future by letting Google Inc. (GOOG), the Information Age’s biggest name, walk away and blocking Facebook Inc.

That’s not to say that the U.S. and China don’t have different, competing and at times conflicting interests. We’ll spare you the inevitable Valentine’s Day references: Obama and Xi don’t have to love each other, but they do have to get along.

Read more opinion online from Bloomberg View.

To contact the Bloomberg View editorial board: view@bloomberg.net.

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For China and U.S., Better Living Through Better Leaders’ Chemistry: View

DongYan Chemistry = LEGENDARY MAGIC

During the press conference for My Beloved on Tuesday, Director Dominic Zapata shared that although he has worked with Dingdong and Marian separately in the past, it’s his first time to work with them together. He also stated in an interview that the chemistry between Dingdong and Marian, aka DongYan, is really magical. In the Manila Standard article, he shared how honored he is to witness the legendary magic that happens when Dingdong and Marian are together.

Direk Dominic has worked with Marian and Dingdong separately in different projects and related that he feels very fortunate to finally work with the two of them in one show. “I’m honored to witness the legendary magic that happens when Marian Rivera and Dingdong Dantes share the screen,” he enthused.(source)

That’s definitely one way to put it. Now make sure to witness once again the legendary magic from DongYan in My Beloved which will premiere in the Philippines on Monday after Biritera and before Legacy. Pionoy TV’s premiere is Februaty 14th. check your Channel Guide for time.

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DongYan Chemistry = LEGENDARY MAGIC

Minnesota companies aim for greener living through chemistry

EarthClean CEO Doug Ruth demonstrates how TetraKO is fire-resistant. He coats his hand in the gel and uses a blowtorch on the product, which resists flames up to 2,000 degrees for several minutes, he says. (Pioneer Press: John Doman)

Lots of entrepreneurs boast about "eating their own cooking," but Doug Ruth takes it to a whole new level.

The CEO and founder of EarthClean, a clean-tech startup in South St. Paul, will pop a fingerful of his company's TetraKO firefighting gel into his mouth to prove it's nontoxic.

EarthClean's product, made of 50 percent cornstarch, is a goopy example of how the green-chemistry movement is starting to grow beyond the seed stage.

Renewable, bio-based substitutes for petroleum-derived chemicals have been under development for several years in Minnesota, but now they're finally starting to sell.

Bio-based plastics are popping up in supermarket delis, consumer electronics and on the shelves at big retailers, and consumers and industry observers are beginning to pay attention.

Some see the state well-positioned as a hub for "green chemistry." At the second annual Minnesota Green Chemistry Forum at the University of Minnesota recently, Dale Wahlstrom, CEO of The BioBusiness Alliance, compared green chemistry to Minnesota's medical-device industry in its infancy decades ago.

But before the industry produces "the next Medtronic," there are challenges to overcome.

First, chemical startups are not like Facebook or Google, which were launched in college dorm rooms.

Cutting-edge chemistry requires laboratories and pilot production plants that can cost a cool million dollars up front before the first product hits the shelf.

Second, chemical-based

products must undergo extensive and expensive regulatory review before they can be sold.

Third, studies show consumers will not buy a product just because it's environmentally friendly, people at the Green Chemistry forum acknowledged. Green companies have to demonstrate that their products can save money as well.

Fourth, Minnesota is competing not just with other parts of the country where green chemistry is bubbling, like California or Massachusetts, but countries like France, Brazil and Canada.

But that has not stopped people from dreaming.

Marc Hillmyer, a chemist and professor at the U of M, said the area has a cluster of green chemistry start-ups, led by NatureWorks LLC, "the juggernaut of renewable polymers."

The Minnetonka-based company, half owned by agribusiness giant Cargill and half by a Thai chemical company, makes a corn-based plastic that goes into everything from clamshell food cases in the deli section to potato chip bags for Target to iPhone cases.

NatureWorks has had a plant in Nebraska since 2002 but is building a second one in Thailand to be closer to its Asian customers, where half of its output is now exported, NatureWorks spokesman Steve Davies said.

Established giants like St. Paul-based Ecolab and 3M, which have long pedigrees in chemistry and polymers, also can play a role, the experts say.

"They're not green-chemistry companies but companies that can practice green chemistry," Hillmyer said.

Green chemistry favors the Midwest, with its feed stocks for new materials and abundant land and water, local experts believe.

And the area is growing the brains for a green chemistry workforce at the U, which opened the Center for Sustainable Polymers three years ago. The center, headed by Hillmyer, received a three-year, $1.5 million grant from the National Science Foundation last year.

SMALLER FOOTPRINTS

The variety of products made with bio-based plastic substitutes once was limited to a few products like flimsy food containers but now includes clothing, carpets, electronic gizmos and other products of everyday life.

Just cruise the aisles of Target or Staples and pick up a slender plastic bottle of Method laundry detergent.

In this case, the green isn't the container. It's in the detergent itself, which carries a bio-based solvent made by Segetis, a Golden Valley startup, that allows the detergent to be super-concentrated.

Segetis, which employs about 35 people, uses a contract manufacturer but has a small "semi-works" at its headquarters that produces about 250,000 pounds of material a year.

Company spokeswoman Tess Fennelly said Segetis is planning to build its own plant with a capacity of "tens of millions of pounds." .

That sounds like a lot, but it's hardly a drop in the bucket of the 13 billion pounds of plasticizers produced globally each year. And it's that room to expand that drives companies like Segetis.

Gevo, a company that is headquartered in Colorado but licenses technology from Cargill, is retrofitting an ethanol plant this year in Luverne, Minn. to produce isobutenol, a basic building-block chemical for petroleum substitution.

Isobutenol's carbon structure can be altered to produce everything from gasoline to jet fuel, for which the company has a contract to conduct a study for the U.S. Department of Defense.

"It's not 10 years from now," Pat Guber, Gevo's CEO told the green chemistry forum audience. "We're doing it now," the former Cargill scientist said. "The game is to make it happen big."

EarthClean has a similar idea. The company started in a small shop in Minneapolis three years ago and gained exposure by winning the first regional Clean Tech Open competition in 2010, and went on to take third in the nationals later that year.

EarthClean moved last year to South St. Paul for more space, taking over a 6,000 square foot office-warehouse. Liana Palaikis, the company's PhD chemist and director of product development has a "lab" in the warehouse, marked off with blue tape on the floor.

The lab is crowded with plastic Home Depot buckets filled with white TetraKO powder, makeshift workbenches with microscopes, hand mixers to mix up beakers of the gel and Kermit the Frog, the company mascot, overseeing operations from a shelf.

In startup fashion, EarthClean operates on a tight budget. Palaikis, who spent many years as a chemist at 3M and has six patents to her name, dreams one day of a separate lab. "It would be really nice," she sighed.

EarthClean has been beta-testing TetraKO with local firefighting units but is just beginning to make sales.

Last year, EarthClean signed a contract to sell TetraKO to South Korea, pending government approval, and it has signed firefighting supply dealerships on the West Coast and in Kuwait, Ruth said.

The product costs about three to five times as much as conventional foam, but it knocks down fires at least five times faster, the CEO said.

That can save fire departments money on total time on a call and save firefighters' lives by reducing the time they are exposed to toxic smoke under heavy stress, Ruth said.

Last year the company, which has nine employees, had $135,000 in sales and it's projecting $1 million this year, Ruth said. The company doesn't expect to turn a profit until the end of 2013, he said.

But as a way of thinking bigger, the company is brainstorming ideas beyond firefighting.

"Which is why we named it EarthClean Corp. and not fire suppression inc." Ruth said.

THE HOUDINI PROBLEM

The ability to walk down the aisles of your neighborhood store and easily find green-chemistry products is a sign of progress, said Steve Kelley, director of the Center for Science, Technology and Public Policy at the Humphrey School and a former state senator.

"Three years ago, I don't think you could say that," he said.

The next steps are more research and innovation to lead to even more bio-based substitutes for petrochemicals in higher quality plastics, Kelley said.

A couple of serial entrepreneurs are working on that next step.

The Selifonovs - Sergey and Olga - are Russian-born chemists who founded Segetis in 2006 and own a minority stake in the company, even though they have no hand in its operations anymore.

Instead, they've been hard at work in Golden Valley on two new polymers to be marketed under separate companies.

One company, called XLTerra, developed a high-grade clear plastic from cellulosic biomass, using materials like corn cobs instead of corn kernels, said Sergey Selifonov, XLTerra's chief technology officer.

The plastic has twice the strength of conventional corn-based plastics called polylactides (PLA for short), he said. It has a long list of possible commercial applications, from durables like Plexiglass and auto parts to semi-durables like a toothbrush handle.

The other company is named Reluceo, which has a degradable superabsorbent polymer that can be used in diapers. Unlike conventional superabsorbent polymers, Reluceo will break down, solving a landfill problem, he said.

Sergey called the challenge to make Reluceo's polymer both superabsorbent and biodegradable "harder than Houdini escaping from that box."

Over the next few weeks, the couple are moving to a lab with more power in Plymouth so they can build a mini-plant that can produce hundreds of kilograms of each material a day. The plant will be large enough to learn how to make the product at industrial scale and to test the new materials in different applications, said CEO Olga Selifonova (the 'a' at the end of her name is the Russian way of denoting gender).

As with Segetis, the Selifonovs said they have gotten financial backing from California-based Khosla Ventures, a big-name venture capital company in renewables.

But it will be several years before either product makes its way to market. The Selifonovs are confident they can do it.

"These are promising and innovative technologies," Olga Selifonova said. "I truly believe they will be commercialized."

Leslie Brooks Suzukamo can be reached at 651-228-5475. Follow him at twitter.com/suzukamo.

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Minnesota companies aim for greener living through chemistry

Texas A&M scientist recognized for chemistry work

 

Published Thursday, February 09, 2012 12:04 AM By MAGGIE KIELY
maggie.kiely@theeagle.com

A&M chemistry professor Dr. Oleg Ozerov holds the Norman Hackerman Award in Chemical Research. Ozerov received the award for his work on greenhouse gases during a ceremony held in his honor at The Clayton Williams Former Student Assosiation building on campus Wednesday.

Texas A&M chemistry professor Oleg Ozerov discovered his passion for chemistry as a 12-year-old in Russia, while experimenting with small-scale explosive material with a friend whom he remains close to today.

He became even more fascinated with the subject when he began learning about it as a freshman in high school, and later went on to earn his master's degree in chemistry at the Russian Academy of Science.

From there, he went on to the University of Kentucky, where he earned his Ph.D. in chemistry before taking a teaching position at Brandeis University.

He made his way to Aggieland in 2009 as a professor with the chemistry department and was hired as the graduate recruitment coordinator in the fall.

But even though his profession has taken him across the globe, Ozerov said he never imagined he'd be sitting in a room full of colleagues and students at the Alumni Center on campus Wednesday, being recognized for his work and honored as the 2012 recipient of the Norman Hackerman Award in Chemical Research.

The award comes with a $100,000 personal check. He'll likely use some of the money to do something nice for those who've helped him along the way -- "especially his research group, which consists of undergraduate, graduate and post-doctoral students, Ozerov said.

A chunk will go into his 3-year-old daughter's college fund, he said.

Ozerov, 35, is the second A&M professor to win the award since it was created by the Welch Foundation in 2002. Paul Cremer was honored as the 2006 recipient.

The Welch Foundation, a national organization founded in 1952 to provide private funding for chemistry researchers, presents the award annually to a Texas chemistry researcher who has made notable achievements during his early career.

Ozerov's research focuses on understanding unusual molecular structures and how to create or break chemical bonds.

During one of his most recent and notable discoveries, Ozerov created a way to break down the carbon-fluorine bond at room temperature.

Carbon-fluorine bonds are considered some of the strongest in chemistry and are often found in greenhouse gases associated with global warming.

The breakthrough could have a positive effect on combating atmospheric pollutants.

"Chemistry fascinates me," Ozerov said. "If you say something is difficult to do, it's like the red flag to the bull, and we have to figure out how to do it."

Ozerov was chosen for the award in part because of his attitude, said Beth Robertson, Welch Foundation chair.

"At only 35, Dr. Ozerov already has made significant contributions in both transition metals and main group chemistry that may ultimately improve our world," she said. "Known for his chemical ingenuity, his work is aimed at exploring exciting new facets of chemistry."

In addition to the Hackerman Award, Ozerov recently was named the 2012 Pure Chemistry Award recipient by the American Chemical Society.

"I don't think I did anything outstanding," Ozerov said after receiving his award Wednesday. "I feel like I understand chemistry. I have an affinity for it, and it was always easy for me to get."



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Texas A&M scientist recognized for chemistry work

Flutes let the bubbles go up your nose

Everyone enjoys a nice glass of bubbly – no one more so than us here at Casa del Chemistry World. But some people go that bit further to investigate just what it is that makes a glass of champagne taste the way it does. And in this case it turns out that the glass can make all the difference.

Gérard Liger-Belair from the University of Reims, France, and his team looked at the concentration of ethanol and carbon dioxide floating above the surface of champagne in the tall, thin flutes and squat, wide coupes using micro-gas chromotography to try to make some quantitive judgements on the merits of the two glasses. They discovered that the levels of carbon dioxide were two to three times higher just above the champagne in a flute than in a coupe, although the level of ethanol was comparable.

Infrared image of carbon dioxide flowing from a champagne flute

They also used an infrared imaging technique to look at carbon dioxide levels and created some amazing pictures of the gas escaping from the drink.

Liger-Belair and his team have spent some years investigating all aspects of bubbly’s taste and smell (nice work if you can get it) and have featured on the pages of Chemistry World a number of times. Liger-Belair himself has written for us extolling the chemical virtues of investigating champagne and it’s packed with interesting facts – did you know champagne corks explode out of the bottle at 60km/h? Or that on the Moon the bubbles in champagne would be three times larger than here on Earth?

So how did the coupe glass come about? Well, it was created in the 17th century especially for the English aristocracy. Later a myth grew up around it that the curves of the glass had been modelled on the breast of Marie Antoinette – unlikely as she hadn’t been born yet. The glass became increasingly popular in the 1930s as its shape encouraged the champagne to go flat quickly for those that weren’t such a fan of the bubbles and burps that go with champagne and it became particularly popular in the US. But coupes’ popularity dived later that century as champagne warms up quickly in these glasses and people came to appreciate the bubbles.

Flutes also appeared around the same time, although designs have become taller and finer over time as glass-working skills and production techniques improved.

But which is better? There’s only one way to find out. Fight! Well, if you prefer your champagne with bubbles then a flute’s the way forward. On top of this, the higher levels of carbon dioxide floating above the champagne give the drink its distinctive nose as the gas irritates the nasal passages. So for the authentic champers experience don’t be a barbarian and stick to a flute!

Patrick Walter

PS Remember to open your champagne safely!

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Cooperative rotaxanes

When I picked up the JACS paper from Belowich et al earlier this week, I have to admit I got quite excited. Not only was this a collaboration between Fraser Stoddart’s lab in the US and Lee Cronin’s here in the UK, but molecules that seem to almost self-catalyse their assembly are very reminiscent of origin of life ideas, which I love. It’s interesting that using the same kind of interactions that biological molecules use, in fine balance, can result in this cascade that gives you much more complicated chemistry, and I couldn’t help thinking that this was an example of the chemicals outsmarting the chemists.

Favourable pi stacking interactions and hydrogen bonding allowed the researchers to get very high yields of these polyrotaxanes

Favourable pi stacking interactions and hydrogen bonding allowed the researchers to get good yields of the polyrotaxanes © J. Am. Chem. Soc.

You can read my story here, but there’s only so much you can fit into a story, so below I’m pasting some more of the details from a conference call I had with Stoddart, Belowich and Ron Smaldone.

And Cronin? Well he didn’t make the conference call, owing to being tied up chatting to the BBC about some unrelated work, but he phoned me a bit later. His involvement in this paper was with the ion mobility mass spec, which proved that the pi-stacked rotaxanes were incdeed stiff, rather than flexible. But Cronin told me that this is just the start of a long running collaboration between his lab and Stoddart’s and the first of several papers due out soon. So as they say, watch this space…

Matt Belowich: The original intent of the project was to make these rotaxanes rigid and inflexible and we had maybe some inkling at the beginning that we might have some cooperative effects, just because of how we were constructing these using non-covalent bonding interactions and pi stacking, but we certainly didn’t suspect it at first and it was something we stumbled upon.

Fraser Stoddart: I think there was another driver, which was just how far we could go in terms of putting numbers of rings and associated numbers of reactions into place and get, in the beginning, acceptable yields. I was blown away by the fact that as Matt went higher and higher the yields maintained their awesome level and in some cases they seemed to get better. And so the fact that we aimed for a 20-rotaxane was just a round number. At Matt’s thesis defence a couple of months ago, somebody asked him if he could make a 50 rotaxane and I don’t think he hesitated for a minute before saying ‘Yes, it’s just a matter of a little more effort.’

MB: Absolutely, it’s just a matter of ‘Do you want to do it and do you want to put in the work?’ I don’t think there’s any question that it could be done.

It seems you were getting phenomenally high yields given the number of components…

MB: Yeah, that was one of the properties that fascinated us so much by this and I think it’s really a testament to the type of chemistry that we were using, which is dynamic covalent chemistry, which is performed under thermodynamic control. If you think about typical organic reactions, which are mostly done under kinetic control, you think about putting two or three components, maybe four at the most, in a reaction and getting, if you’re lucky, 90% yield. But because of our thermodynamically controlled reactions we can put in, in the case of the 20 rotaxanes I think 39 components and 38 reactions, and get these remarkable yields of 90% overall, which means each individual reaction is occurring in greater than 99.7% efficiency.

FS: I want to raise one thing. If you analyse the possible mechanism, which we’ve done in the presence of computational chemist Bill Goddard at Caltech… he reminded me that it must be remarkable from the point of view of entropy because you’re ending up with something that’s very very highly ordered. But the point is a route to it. If there wasn’t crosstalk between the rings, you’d expect them to be jumping around when the first one, the second one is on, the third one and that must mean that these intermediates must be pretty highly entropically favoured. And yet all of that seems to be overcome, presumably by the enthalpy garnered, as Matt points out, not only by the hydrogen bonding interactions that associates each ring with its charged centre on the dumbbell, but the pi-pi stacking interactions that come into play between the rings. One can just speculate, and we’re waiting on Goddard to shed more light on the reaction, that the rings might come on willy nilly to begin with. But my way of thinking of it is that they then cluster and that these clusters form the basis for the cooperativity. A bit like there are several cars on the road to begin with that are moving twowith some sort of velocity and then there’s a sudden acceleration.

It starts and then it reaches a tipping point and shoots and accelerates to the end point?

FS: I think it’s a bit like crystallisation in that it’s crystallisation in one dimension. If you draw the analogy then you can think that we’re as ignorant of the real details of the reaction as one is today about the process of crystallisation. You know, the editor of Nature back in the 1980s some time, Sir John Maddox, said that even at that time, and it could be repeated today, that we know little or nothing about that process. So I think that the last comment I’ll make is that this area of dynamic covalent chemistry – mechanistically we’re really in the dark ages, we are still just waving our hands. It’s nowhere near as developed as if it were a kinetic reaction and you could talk about SN1 or an SN2, or an E1 or an E2 or whatever it might be in terms of mechanism.

MB: We know what happens at the very beginning and what the outcome is but for everything in between we have blindfolds on. I think just looking at the mechanism of forming the 2 rotaxane, with just one ring, is difficult enough and you can imagine with 19 rings it’s just impossible right now. It’s very much an open area of research right now.

Ron Smaldone: My part of this project was to explain some of this using some basic computational chemistry. But what we found with the calculations was that there was actually a remarkable change when you went from the non-rigid type of rotaxanes, which are really only a couple of atoms or bonds longer in their spacing than the ones Matt made and the structure were remarkably different. I think it’s really cool that if you look at the interactions that are involved – really just solvent, hydrogen bonds and pi stacking as far as the non-covalent interactions go – it’s really similar to the way DNA assembles and if you look at a lot of studies of synthetic DNA you see that there’s a very cooperative type of assembly as well. It’s kinda cool, and it’s one of the things I really like about supramolecular chemistry, that you can use the same interactions that nature uses and it doesn’t really matter what the bones are of your molecule, you can still use some similar things with it. Matt’s molecule in some ways looks like a DNA but it’s really not at all like DNA, but its assembly properties are actually pretty similar, in some ways, to DNA. Which I think is remarkably cool and offers the potential to use the concepts of nature to make things that aren’t really like nature at all. You can never imagine using these rotaxanes to make synthetic life forms or anything like that but maybe you could use them as a really smart assembly for materials that use the same principle as nature but for a totally different purpose. That’s one of the things I thought was really cool, just very small changes in the molecule totally change its properties.

It struck me that you’ve got this very complicated thing and then it starts to self-assemble and self-catalyse. Are you going to look back and see other ways that things can cascade? Are you going to use this inspired approach to lead to different things?

FS: I think one is going to see more of this type of chemistry, more of this type of synthesis. As Ron puts it, it’s bio-inspired if you want to put it in that language. We tend to approach our chemistry based on a decade or two, or three now, of weak interactions being studied under the umbrella of supramolecular chemistry. But one’s never far away from the fact that when you make an observation such as Matt made with these bigger and bigger rotaxanes, that got almost easier to make, if you put aside the effort he had to put in to make the dumbbell. After that it was just zip, zip, zip to get these products. But I would like to put a note of caution – it took probably five or six years to get to where we are today. The interactions are very finely balanced and I think of the inspiring things was that Matt went back and looked at a piece of chemistry that had been published a few years ago and said, ‘Let’s reduce the space between the rings,’ and that’s what Ron was alluding to as well, to the point where we have this magic 3.5 Angstroms, the same stacking distance that you get between the bases of DNA, and see what happens. You can look back in retrospect and say we should have thought about this a bit earlier. It took us a little bit of time to work this out but once we got it, it just took off and the sky would seem to be the limit.

Laura Howes

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Chemistry teacher still going at 93

AKRON -- Henry "Hank" Stevens stands in a chemistry lab at the University of Akron.

A dozen students at desks in front of him await his instruction. A chart of the Periodic Table of the Elements covers part of the wall to his side.

For Stevens, teaching chemistry, being around young people and staying busy has been an elemental part of his life for a long time. A very long time.

Stevens, who will turn 94 in April, is the oldest employee on campus. For parts of six decades, he has taught chemistry at UA. He thinks he "remains young" by helping students, often 75 years younger than him, understand chemistry.

"I enjoy the contact with young people," said Stevens, a Vienna native who immigrated to the U.S. in 1939 after serving in the Austrian army.

He received his undergraduate degree in chemistry from Columbia University, married his wife, Jean, and moved to Barberton in 1941 to work for Columbia Southern, which became PPG. Later, he moved to Akron and received his master's and doctorate degrees in chemistry from Western Reserve University while working at PPG.

His first stint as a part-time faculty member was from 1954 to 1963, when he taught doctoral students in the graduate school.

One of his first students was Frank Kelley in a polymer science class. Kelley later became dean of UA's College of Polymer Science.

Stevens retired from PPG following a 42-year career in which he occupied a variety of positions, including chemist, and worked with universities across the country on technology transfer. He began teaching again in 1986 and still teaches one class per semester.

Stevens has taught in the graduate and undergraduate schools at UA as well as through Summit College, where this year he is teaching two sessions of a basic chemistry laboratory.

Throughout the years, he has taught general organic and biochemistry, organic chemistry as well as many other classes.

This semester, Stevens is at UA five hours per week, split evenly between the two labs.

But teaching isn't the only activity that keeps him busy. He is a choir member at Westminster Presbyterian Church and at the University of Akron Symphony Choir.

He gives back in other ways, as well.

The father, grandfather and great-grandfather regularly visits the sick at the Rockynol Retirement Community, where he resides in the independent-living section.

And he gives back through the Dr. Henry C. and Mrs. Jean Stevens Chemistry Fellowship he established in 2006, about a year before his wife died. The foundation is designed to attract highly qualified students to UA's doctoral program in chemistry.

Every year, about $2,000 is given to UA students, he said. University officials said $14,000 has been awarded since the fellowship was established. Every year, he said he invests the money that he is required to take out of his IRA back into the fellowship.

Lori Kraft, associate professor of general technology in Summit College's Department of Engineering and Science Technology, said she hopes she is as active as Stevens when she is in her 90s.

"He is an inspiration," she said. "He told me the kids make him feel young, so I think that is a big motivating factor to have him come back to the lab every week."

Stevens said the bottom line is he likes to stay busy.

"I'm a person who wouldn't sit around," he said. "I need to do something. ... The idea of sitting in front of the tube and having nothing to do doesn't appeal to me."

See original here:
Chemistry teacher still going at 93

Will Imran-Kareena's chemistry work at box-office?

New Delhi, Feb 7 (IANS) Karan Johar is returning this week to woo the box office with a romantic comedy which coincides with the Valentine's Day revelries. He has teamed up with the fresh pair of Imran Khan and Kareena Kapoor to attract the audiences.

Directed by debutant Shakun Batra, the film's cast has Boman Irani, Ratna Pathak Shah and Ram Kapoor and it will be released on 1,200 screens worldwide. It is made at an approximate budget of Rs.25-30 crore.

In "Jaane Tu... Ya Jaane Na", Ratna had played Imran's mother, but her character in the new film is a complete contrast.

In the film, Rahul Kapoor (Imran), an architect in Vegas, loses his job, but doesn't share the bad news with his parents and secretly starts the job hunt. His life takes a turn when Riana Braganza (Kareena), a quick-witted hairstylist, enters his life.

They meet and after a fun-filled night of debauchery, Rahul and Ria wake up to discover they've got married. They decide to annul their marriage, but in the course of next 10 days they stay together, fight, laugh and end up developing an unlikely friendship which eventually turns into love.

The film was earlier titled "Short-Term Shaadi", but later changed to "Ek Main Aur Ekk Tu". Going by the promos, the film seems to be targetted towards younger audiences.

Extensively shot in Las Vegas, the entire cast and crew enjoyed working there as the shooting schedule coincided with the festive season of Christmas and New Year celebrations.

Some parts of the film have also been shot in Pataudi, Haryana.

While shooting for the film, Imran also turned a photographer and clicked Kareena. Later, an exhibition was held where all those photographs were put on display.

There were reports that the film's story is similar to that of Cameron Diaz and Ashton Kutcher-starrer "What Happens In Vegas", but the producer denies this contending that the fact that they get married in Vegas is only an aspect of the movie and not the entire movie. The story is different.

The peppy and fun-filled songs of the film composed by Amit Trivedi are already a rage among youngsters and are being frequently played on radio stations.

After the success of Dharma Productions' "Agneepath", expectations are high from the romantic comedy which is also produced by the same banner.

Originally posted here:
Will Imran-Kareena's chemistry work at box-office?

Diabetics’ device delivers DNA detection

Last year, we reported on some research that was repurposing personal glucose meters (PGMs; the little devices that detect your blood sugar level) to enable the detection of a variety of other analytes (cocaine and uranium, among other things). Now the same team have adapted the idea to the detection of DNA, with impressive precision and sensitivity.

But before you rush out and set up a street-corner screening service, there’s a little more chemistry involved. The glucose meters are just plain old glucose meters and don’t actually detect DNA; the trick lies in converting the chemical you’re interested in to a glucose response that the PGM can detect.

Effectively, the team have built a sort of chemical transducer that takes a DNA signal and turns it into a glucose signal. The transducer has two parts: an enzyme – DNA invertase – that turns sucrose into glucose, and a magnetic bead. The enzyme and the bead are each connected to DNA strands that match up to the target DNA strand you hope to detect. So, in the presence of the target DNA, the magnetic bead and the enzyme are brought together and you can then remove the whole thing with a magnet, pop it in some sucrose, and in seconds your glucose meter can tell you if you’ve got hepatitis B (or something else, probably, but that’s what these chaps were looking for).

So, in future you might find yourself asking to borrow a diabetic friend’s PGM. ‘I didn’t know you had diabetes,’ they’ll remark, and you can smugly reply, ‘ I don’t – I’ve got hep B’.


Philip Robinson

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