Dominican University professor explores links to breast cancer

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Dominican University of California associate professor Dr. Maggie Louie.

There will be no summer vacation for Dr. Maggie Louie, an associate professor of biochemistry at Dominican University in San Rafael.

Louie and her two student assistants are working through the summer, continuing their research into the role that the heavy metal cadmium plays in the incidence of breast cancer. She and her team have received more than $450,000 in grants from the National Cancer Institute at the National Institutes of Health to fund their work.

In April, Louie released research results that show cancer cells become increasingly aggressive the longer they are exposed to small concentrations of cadmium, commonly found in cosmetics, food, water and air particles. While other studies had previously shown links between acute cadmium exposure and breast cancer, Louie's study is one of only a few to link chronic cadmium exposure to the disease.

Now, Louie says she is investigating further to understand the biochemical process involved, and she believes she has found a protein that plays a key role.

"We've identified a potential player, which is stromal cell-derived factor-1 (SDF-1)," Louie said, "and we're trying to figure out how this small protein is being regulated by cadmium and what its role is in terms of increasing the cancer's ability to metastasize."

Louie said, "Unfortunately, cadmium is all around us. Cadmium is in our food, our water, our makeup, and our air."

Cadmium is produced mainly as a byproduct

Louie said many people believe there is nothing to worry about because the levels of exposure are so low. She, however, has her doubts.

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Dominican University professor explores links to breast cancer

A deeper look into the pathogen responsible for crown gall disease in plants

Public release date: 11-Jul-2012 [ | E-mail | Share ]

Contact: Angela Hopp ahopp@asbmb.org 240-283-6614 American Society for Biochemistry and Molecular Biology

Next week's Journal of Biological Chemistry "Paper of the Week" by Wai Mun Huang and colleagues at the University of Utah Health Sciences Center and the University of Minnesota reveals new insights into the molecular properties of the rod-shaped soil bacterium Agrobacterium tumefaciens, the pathogen responsible for crown gall disease, a tumor-forming infection in plants, such as tomatoes, walnuts, grapes and beets.

The bacterium is parasitic: It infects its plant host by entering through an open wound, inserts a small segment of its genetic code into the plant's genome, devours energy made by the plant, and forms knobby brown lesions on the plant stem.

Huang's group focused on the pathogen's genetic material. Most bacteria have circular chromosomes. But A. tumefaciens C58, the strain studied by Huang's group, contains one circular chromosome and one linear chromosome (along with two circular plasmids). Huang's research illuminates how this bacterium maintains its linear chromosome.

Huang's team ascertained the DNA sequence for the telomeres, or the protective end caps, of the linear chromosome in A. tumefaciens C58 and confirmed that an enzyme, TelA, actually forms them by making hairpin loops. These end caps are important for maintaining the stability of linear chromosomes. Interestingly, TelA also binds the telomeres. This activity is unique among bacterial enzymes of this kind and may protect the telomeres (which degrade over time and thus lose their ability to preserve DNA), as telomere binding proteins do in eukaryotes.

"Hairpin-ended linear chromosomes and plasmids are found in a number of branches of bacteria and viruses," Huang says. "They are simple and elegant to form and to maintain." But what remains to be understood is why this linear configuration is not more common or even the preferred configuration for bacteria, Huang emphasizes.

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From the article: "Linear chromosome generating system of Agrobacterium tumefaciens C58: Protelomerase generates and protects hairpin ends" by Wai Mun Huang, Jeanne DaGloria, Heather Fox, Qiurong Ruan, John Tillou, Ke Shi, Hideki Aihara, John Aron, and Sherwood Casjens

Link to Paper in Press version of article: http://bit.ly/MfBz8C

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A deeper look into the pathogen responsible for crown gall disease in plants

MU Researcher Receives NIH MERIT Award

COLUMBIA The bacterium Escherichia coli (E. coli) has a rudimentary molecular "memory" that allows it to swim toward the richest sources of food. MU biochemistry professor Gerald Hazelbauer's discoveries about bacteria could shed light on human and animal sensory, memory and response systems.

"When I began my work as a researcher in the late 1960s, studying bacterial behavior was a curiosity and its significance unclear," Hazelbauer said. "Now, decades later, the research done by my group and others has grown into a body of knowledge about the fundamental processes used by all living things to recognize, remember and respond to changes in their environments."

The National Institute of General Medical Sciences (NIGMS) recently recognized and rewarded Hazelbauer's scientific contributions by granting him a "Method to Extend Research in Time" (MERIT) Award. The award, which is worth at least $5.5 million over 10 years, will allow him to continue his research without re-applying for funding. Hazelbauer joins only 11 other MU researchers who have received the MERIT award, including his wife, Linda Randall, who is also a biochemistry professor.

MERIT awards are intended to foster creativity and allow researchers to take more time to develop new techniques.

The awards are given only to scientists who have proven themselves by succeeding in at least 10 years of previous NIGMS-funded research and who seem likely to continue making valuable contributions to their field.

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MU Researcher Receives NIH MERIT Award

Honey Bees Reveal Link Between Sugar Sensitivity And Metabolic Disorders

Featured Article Academic Journal Main Category: Biology / Biochemistry Also Included In: Diabetes;Obesity / Weight Loss / Fitness;Nutrition / Diet Article Date: 03 Jul 2012 - 3:00 PDT

Current ratings for: Honey Bees Reveal Link Between Sugar Sensitivity And Metabolic Disorders

Lead author Ying Wang, a research scientist, in the School of Life Sciences in the College of Liberal Arts and Sciences at Arizona State University (ASU), and colleagues, write about their findings in a paper published on 28 June in the open access journal PLoS Genetics.

Honey bees offer a useful model for studying what influences food-related behavior, such as the role of taste sensitivity in making choices between foods rich in carbohydrate and food rich in protein (for bees this is choosing between nectar and pollen).

A young bee's sensitivity to sugar predicts what she will forage for later in life, as Wang explained to the press:

"A bee's sensitivity to sugar reveals her attitude towards food, how old the bee is when she starts searching for nectar and pollen, and which kind of food she prefers to collect."

To study the processes that influence this, Wang and colleagues successfully inactivated two genes in the "master regulator" that controls the bees' food-related behavior.

When they did this, they discovered a possible molecular link between sweet taste perception and the state of internal energy.

"By suppressing these two 'master' genes, we discovered that bees can become more sensitive to sweet taste. But interestingly, those bees also had very high blood sugar levels, and low levels of insulin, much like people who have Type 1 diabetes," said Wang.

One of the genes they suppressed is called vitellogenin, which codes for a protein in the bee's fat cells and is similar to a human gene called apolipoprotein B. The other gene is called ultraspiracle, which partners with an insect hormone that has some functions in common with the human thyroid hormone.

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Kap girl published

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Scientists urge new approaches to plant research

ScienceDaily (June 29, 2012) You'd be amazed at how much you can learn from a plant.

In a paper published this week in the journal Science, a Michigan State University professor and a colleague discuss why if humans are to survive as a species, we must turn more to plants for any number of valuable lessons.

"Metabolism of plants provides humans with fiber, fuel, food and therapeutics," said Robert Last, an MSU professor of biochemistry and molecular biology. "As the human population grows and nonrenewable energy sources diminish, we need to rely increasingly on plants and to increase the sustainability of agriculture."

However, Last and co-author Ron Milo of the Weizmann Institute of Science point out that despite decades of plant genetic engineering, there are relatively few types of commercial products originating from this body of work.

"This is in part because we do not understand enough about the vastly complex set of metabolic reactions that plants employ," Last said. "It's like designing and building a bridge armed only with satellite images of existing bridges."

The authors say that perhaps the best approach is to bring together a variety of disciplines -- not just plant scientists -- to study how plants operate.

They also suggest looking hard at what brought plants to the place they are today -- evolution.

"We think that understanding design principles of plant metabolism will be aided by considering how hundreds of millions of years of evolution has led to well-conserved examples of metabolic pathways," Last said.

One of the amazing aspects of plant metabolism is this: It must continuously strike a balance between evolving to meet an ever-changing environment while maintaining the internal stability needed to carry on life as it knows it.

In addition, the authors point out that plants experiment with specialized (also called secondary) metabolism which can produce novel chemicals that are used to defend against pathogens and herbivores.

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FMRI Brain Scanner Reads Thoughts Letter By Letter

Featured Article Academic Journal Main Category: MRI / PET / Ultrasound Also Included In: Neurology / Neuroscience;Medical Devices / Diagnostics;Biology / Biochemistry Article Date: 02 Jul 2012 - 3:00 PDT

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Bettina Sorger of Maastricht University in The Netherlands and colleagues report their work in the 28 June online issue of Current Biology.

Human communication depends on being able to move and use a multiplicity of muscles, such as in forming sounds and words and making gestures and facial expressions. To do this the neuromuscular system must be healthy and undamaged. But severely motor-disabled patients, such as those with locked-in syndrome, who are fully conscious and aware, can't have a back-and-forth conversation because their neuromuscular system is not intact.

The challenge to scientists trying to find ways to enable such patients to communicate is to tap into those parts of the brain that are performing the mental tasks of communication but are denied the means with which to express them physically, using the motor system or voluntary muscles.

fMRI tracks brain activity by measuring changes in blood flow (hemodynamics) and oxygen in the brain. When a brain area is more active it uses more oxygen, and to meet this increase in demand, the blood flow to the area increases. Thus using fMRI, researchers can produce activation maps that show which parts of the brain are involved in particular brain processes.

Neuroscientists like Adrian Owen and his team have already used fMRI to assess consciousness in people thought to be in an unconscious vegetative state and thus incapable of thought, and enabled them to respond yes or no to questions.

This latest study by Sorger and colleagues takes that work a stage further, as Sorger explained to the press:

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FMRI Brain Scanner Reads Thoughts Letter By Letter

Grant brings student researchers to Western

This summer, from June 18 through Aug. 24, Western will host 10 students from across the country to participate in the Research Experiences for Undergraduates Program.

Spiegel, who is involved in REU, said this program benefits Westerns community by making the department and university more visible to other institutions and expanding Western's already vibrant research culture. Students need to be exceptional academically, show interest in research in their personal statements and we look for students who wouldnt have this opportunity otherwise, he said.

The main purpose of the REU program is to give students the opportunity to experience authentic research not found anywhere else, according to Westerns chemistry department's website.

Many students involved in the REU are from community colleges and small liberal arts universities, which may not have the funding or facilities to provide this kind of experience, Spiegel said.

REU programs at other institutions around the country work in a broad range of scientific fields, but at Western the focus is on chemistry, according to the chemistry department's website. During the 10-week program, Western provides students with a $4,500 stipend, a $1,000 allowance for meals and a reimbursement on travel expenses.

Nathan Drake, a Western student and biochemistry major, is head of support for the REU program.

Students are able to ask him questions they dont feel as comfortable asking their assigned faculty members, such as the best place to get coffee, supplies for living situations and can utilize him as a tour guide to make the transition easier, Drake said.

Charlie Snyder, an REU participant from Skidmore College in New York, is working with John Gilbertson to find a metal complex that can turn carbon dioxide into carbon monoxide, she said. Snyder said she thinks this the extensive lab experience will build her skills and improve her resume.

Visiting students work either with existing groups or individually, and always with a faculty member as a mentor. The research focuses on the field of synthetic chemistry, biochemistry and materials chemistry, Spiegel said. Being humbled by undergraduates' enthusiasm and raw intelligence are Spiegels favorite parts about working with the students, he said.

Washington benefits from this program because qualified students are better prepared for a high-tech, competitive workforce after graduation. Many program alumni get jobs in the Seattle area, Spiegel said.

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Exercise is key in the fight against Alzheimer's disease

Public release date: 27-Jun-2012 [ | E-mail | Share ]

Contact: Angela Hopp ahopp@asbmb.org 240-283-6614 American Society for Biochemistry and Molecular Biology

In a recent Journal of Biological Chemistry "Paper of the Week," research led by Ayae Kinoshita at the Kyoto University Graduate School of Medicine in Japan reveals the benefits of exercise in combating Alzheimer's disease.

The most common cause of dementia, Alzheimer's disease results in the loss of cognitive faculty. In the majority of cases, Alzheimer's disease occurs after age 65, and factors such as diet and exercise appear to play a role in its development, with high-fat diets as a risk factor.

Kinoshita's research compared the effects of 1) diet control, 2) voluntary exercise and 3) diet control plus exercise in an Alzheimer's disease mouse model. The results showed that exercise was more beneficial than diet control in reducing -amyloid formation (a defining characteristic of Alzheimer's disease) and restoring memory loss induced by a high-fat diet in these mice. Moreover, Kinoshita's team found that the effect of diet control plus exercise was not significantly different than exercise alone. They attribute the positive effects of exercise to increased degradation of -amyloid deposits in the brain.

"Based on the results in this research," Kinoshita suggests, "exercise should be given priority to prevent Alzheimer's disease."

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From the article: "Exercise is more effective than diet control in preventing high fat diet-induced -amyloid deposition and memory deficit in amyloid precursor protein transgenic mice" by Masato Maesako, Kengo Uemura, Masakazu Kubota, Akira Kuzuya, Kazuki Sasaki, Naoko Hayashida, Megumi Asada-Utsugi, Kiwamu Watanabe, Maiko Uemura, Takeshi Kihara, Ryosuke Takahashi, Shun Shimohama and Ayae Kinoshita

Corresponding author: Ayae Kinoshita, School of Human Health Sciences, Kyoto University Graduate School of Medicine in Kyoto, Japan; email: akinoshita@hs.med.kyoto-u.ac.jp

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Exercise is key in the fight against Alzheimer's disease

Grb2 holds powerful molecular signaling pathway in check

ScienceDaily (June 22, 2012) Once considered merely a passive link between proteins that matter, Grb2 -- pronounced "grab2" -- actually lives up to its nickname with its controlling grip on an important cell signaling pathway, scientists at The University of Texas MD Anderson Cancer Center report in the June 22 issue of Cell.

"Grb2 is a switch that controls normal signaling through the fibroblast growth factor receptor (FGFR)," said the paper's senior author, John Ladbury, Ph.D., professor in MD Anderson's Department of Biochemistry and Molecular Biology.

"Perhaps the best way to think about it is that Grb2 controls cell homeostasis (stable state) before a growth factor binds to FGFR, activating this molecular pathway," Ladbury said.

In addition to discovering a fundamental aspect of FGFR signaling, the researchers' discovery points to a potential explanation of why genomic alterations found in breast, bladder and gastric cancers and melanoma might promote cancer formation and growth, Ladbury noted.

FGFR has a docking station to receive growth factors on the cell surface, and another internal region that passes the growth factor signal on to proteins inside the cell by attaching phosphate groups to them.

FGFR employs phosphorylation to regulate a number of important processes, including the cell cycle, cell proliferation and migration. When some of these pathways become overactive, they can contribute to cancer growth and survival.

Like "a car idling in neutral" ready to go

Grb2's full name reflects its location: growth factor receptor-bound protein 2. In the great rush of molecular signaling pathway mapping in the 1990s, Ladbury noted that Grb2 was labeled an "adaptor protein," one that has no activity of its own apart from connecting to other proteins.

Mapping ran way ahead of figuring out each protein's function in a signaling pathway, Ladbury said, and scientists are still catching up in that area.

"When you think about it, why would a cell bother to produce a protein that plays only a passive role linking one protein to another?" Ladbury said. He and his colleagues found that's simply not the case with Grb2.

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Grb2 holds powerful molecular signaling pathway in check

Ezose Sciences Announces Appointment of Chief Operating Officer

PINE BROOK, N.J.--(BUSINESS WIRE)--

Ezose Sciences Inc. announced today that Scott A. Siegel, Ph.D., Vice President, Business Development, has been named Chief Operating Officer, a new position at the company.

Dr. Siegel will assume broad responsibility for operations at Ezose, which focuses on glycomics research to identify biomarkers for use in drug development and disease management, and to characterize biotherapeutic glycoforms. He will also continue to lead Business Development. In his new role he will continue to report to Kiyoshi Nagata,Ph.D., Chairman andChief Executive OfficerofEzose.

Scott has made Ezose a partner of choice for healthcare companies and academic institutions that seek to realize the promise of glycomics in their R&D programs, said Dr. Nagata. At the same time, his talents and energies have already supported various operational activities at Ezose. We look forward to the still broader contributions he will make in his new position.

The naming of a chief operating officer, together with the other appointments we are announcing today, demonstrates our commitment to helping our partners establish glycomics as a basic tool in their biomedical research.

Dr. Siegel brings to his role more than 25 years of experience in the biotechnology and pharmaceutical industries. Before joining Ezose in 2009 he was Vice President of Corporate Development for Redpoint Bio, a publically traded biotechnology company. Earlier, he held various positions in New Business Development and Worldwide Strategic Marketing at Johnson & Johnson. He has served in R&D capacities at Phytera, Inc., Centocor, Inc., and Becton Dickinson and Co., and as Adjunct Associate Professor of Microbiology at the University of Pennsylvania. Dr. Siegel is one of the inventors of Remicade (Infliximab), a therapy for rheumatoid arthritis and other inflammatory disorders.

Dr. Siegel earned his Ph.D. in Biochemistry from the State University of New York, Downstate Medical Center, and completed his postdoctoral studies in the Department of Pharmacology at Yale University School of Medicine.

In other recent appointments, Ezose named:

About Glycomics

Glycomics is the study of glycans, the sugar chains that during the biochemical process known as glycosylation become attached to many proteins expressed by human cells. The particular glycans involved may crucially determine the function of the resulting glycoprotein and its role in health and disease.

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Ezose Sciences Announces Appointment of Chief Operating Officer

A new model to understand the supertasting phenomenon

Public release date: 21-Jun-2012 [ | E-mail | Share ]

Contact: Angela Hopp ahopp@asbmb.org 240-283-6600 American Society for Biochemistry and Molecular Biology

Supertasting describes the ability to strongly detect food flavors such as bitter and sweet, and it can affect a person's food preferences. For example, supertasters are often averse to green vegetables because their bitter taste is amplified. Supertasters may also prefer foods lower in sugar and fat. Approximately one out of four people is a supertaster, and a supertaster's avoidance of sweet and fatty foods may have protective cardiovascular effects.

Christopher Nosrat and colleagues at the University of Tennessee Health Science Center and the Monell Chemical Senses Center in Pennsylvania have developed a new mouse model that may be useful to study supertasting. The team's work was reported in the Journal of Biological Chemistry.

Nosrat's group developed mice whose taste buds overexpress brain-derived neurotrophic factor, a growth factor for neurons and a protein that is important for the distribution of nerves to sensory organs, such as taste buds. These mice had larger taste buds, an increased number of taste cells per taste bud, and a greater supply of nerves in the taste buds compared with the control mice. These features suggest that the mice could be a model for supertasters, whose tongues have an increased number of fungiform taste buds (a specific kind of taste bud on the front and sides of the tongue that detects the five basic tastes).

"By generating the supertaster rodent model," Nosrat reports, "we are able to study the supertasting phenomenon in detail." Furthermore, brain-derived neurotrophic factor is important for proper development of the nervous system, Nosrat explains, and this mouse model can facilitate the development of therapies for nerve injuries in which taste signaling to the brain has been damaged.

###

From the article: "Targeted taste cell-specific overexpression of brain-derived neurotrophic factor in adult taste buds elevates phosphorylated TrkB protein levels in taste cells, increases taste bud size, and promotes gustatory innervation" by Irina V. Nosrat, Robert F. Margolskee, and Christopher A. Nosrat. See it online: http://www.jbc.org/content/287/20/16791.

Corresponding author: Christopher A. Nosrat, Center for Adult Cancer Research, University of Tennessee Health Science Center in Memphis; email: canosrat@gmail.com.

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How Protein Clumps Are Pulled Apart

Editor's Choice Main Category: Biology / Biochemistry Article Date: 20 Jun 2012 - 11:00 PDT

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In humans, amyloid fibers form biological nanostructures that house pigments and other molecules, and may also play an important role in long-term memory. These fibers are one of the most stable protein-based structures in nature, so when they are harmful in diseases, such as Parkinson's, they are extremely difficult for cells to break down.

As a result, Martin Duennwald and AnaLisa Echeverria, at the Boston Biomedical Research Institute, and James Shorter, assistant professor of Biochemistry and Biophysics at the University of Pennsylvania, set out to find ways to promote beneficial amyloid fiber assembly or to reverse its pathogenic assembly, at will. The study is published in PLoS Biology.

Yeast have a protein called Hsp104 that can quickly disassemble amyloid fibers, and this activity is significantly enhances by a group of small heat shock proteins. However, humans and other animals do not have the Hsp104 protein, thus raising the question of whether human cells are also capable of disassembling amyloid fibers?

In this study, the researchers found that when Hsp104 is absent, the yeast small heat shock proteins work together with other proteins to disassemble amyloid fibers. The proteins slowly remove each subunit one by one from the tips of the fibers. The team were surprised by this activity as these proteins are best known for their role in preventing protein clumping.

Shorter explained:

According to the researchers, the proteins of the amyloid-disaggregating machinery in yeast are also present in humans. Therefore, human small heat shock proteins are able to work together with other proteins to disassemble amyloid fibers, even without Hsp104.

They state that these findings could lead to the development of new therapies for different neurodegenerative disorders.

Their aim is to activate the machinery in humans to pull apart disease-causing amyloid fibers where and when needed by increasing the expression of heat shock proteins.

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Power Impian leads with revolutionary skin care trend

21st June, 2012

Power Impian International Sdn. BHd., a subsidiary of Power Root Group has cooperated with Mibelle Biochemistry to launch an innovative anti-aging product, Impian SemCell at Swiss Garden Hotel, Kuala Lumpur, on 24 May 2012 and MOU signing ceremony has been held between Power Impian International Sdn. Bhd., Chemical Solutions Sdn. Bhd. and Mibelle Biochemistry for the exclusiveness agreement of latest innovative skin care formulation, DermCom Forte to Power Impian.

PhytoCellTec Malus Domestica was the result of scientific research by Dr. Fred Zulli from Mibelle Biochemistry. According to the research, Swiss Apple Stem Cell (PhytoCellTec Malus Domestica) is able to increase the vitality of body stem cell up to 92% thus is good for improving overall body health and youthfulness.

Since its launch in November last year, Power Impian have received a lot of positive feedback and testimonies for anti-aging benefit as well as health regained benefit such as reduced skin scars for allergic problem, improved skin radiance and fairer skin etc. From the testimony feedback, the consumer can have the significant changes for the skin problem and health problem within a short period time of consumption.

To answer the ever growing demand and to fit the needs of everyone, Power Impian has now cooperated again with Mibelle Biochemistry and Chemical Solutions Sdn. Bhd. to further formulate a qualitative and innovative skin care product series enhanced with DermCom Forte, one natural active ingredient formulation for skin care cosmetic which is just launched in Barcelona in last month and has been awarded silver prize. This active ingredient has been studied and came out with a lot of supportive data from Dr. Fred Zulli. With this new and unique formulation supported by the latest technology and clinical study, this upcoming skin care product series will be the superb quality choice and would perform satisfactorily in the market.

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Link between vitamin C and twin seedlings can increase seed production in crops

ScienceDaily (June 18, 2012) Biochemists at the University of California, Riverside report a new role for vitamin C in plants: promoting the production of twins and even triplets in plant seeds.

Daniel R. Gallie, a professor of biochemistry, and Zhong Chen, an associate research biochemist in the Department of Biochemistry, found that increasing the level of dehydroascorbate reductase (DHAR), a naturally occurring enzyme that recycles vitamin C in plants and animals, increases the level of the vitamin and results in the production of twin and triplet seedlings in a single seed.

The value of the discovery lies in the potential to produce genetically identical seedlings and increase production of high-value crops.

"The ability to increase fertility can be extremely useful when the inherent rate of fertility is low or the value of the crop is great, such as corn in which the production of multiple embryos would significantly boost its protein content," Gallie said. "The extra seedlings per seed may also enhance per-seed survival chances for some species."

Study results appear in the online journal PLoS ONE.

Just as in humans, twins in plants can be either genetically identical or fraternal. Gallie and Chen discovered that the twins and triplets produced in tobacco plants when vitamin C was increased were true twins or triplets as they were genetically identical.

In the lab, the researchers went on to show that injecting plant ovaries with vitamin C was sufficient to produce twins or triplets and that the vitamin causes the zygote, the fertilized egg, to divide into two or even three fertilized egg cells before these cells proceed through subsequent stages of development to produce twins or triplets.

Although they used tobacco in their research, Gallie predicts vitamin C could generate twins and triplets in other plants as well.

"Because the early stages of embryo development are so conserved among plant species, we expect that vitamin C will have a similar effect in almost any plant," he said.

A question raised by the study is whether vitamin C might have a similar effect in humans. In contrast to most animals, humans cannot make vitamin C and it must, therefore, be obtained regularly from dietary sources.

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Link between vitamin C and twin seedlings can increase seed production in crops

Set science free from publishers' paywalls

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IF YOU would like to read the latest research from my lab, be my guest. Our report on a protein from a mouse version of the winter vomiting virus has just been published in the journal PLoS One and is available online for free to anyone (vol 7, p e38723).

Contrast that with my first paper, published in 1990, which you could only have read if you had access to a university library with an expensive subscription to the journal Biochemistry.

Back in 1990 before the world wide web that was how scientific publishing was done. Today it is being transformed by open access publishers like the Public Library of Science. Rather than being funded by journal subscriptions, these publishers charge authors or their institutions the cost of publication and make their papers available for free online.

Many scientists are passionate supporters of open access and want to see the old model swept away. They have launched a protest movement dubbed the Academic Spring and organised a high-profile boycott of journals published by Elsevier. And the tide appears to be turning in their favour. This week the Finch Report, commissioned by the UK government, recommended that research papers especially those funded by the taxpayer should be made freely available to anyone who wants to read them.

Advocates of open access claim it has major advantages over the subscription model that has been around since academic journals were invented in the 17th century. They argue that science operates more effectively when findings can be accessed freely and immediately by scientists around the world. Better yet, it allows new results to be data-mined using powerful web-crawling technology that might spot connections between data insights that no individual would be likely to make.

But if open access is so clearly superior, why has it not swept all before it? The model has been around for a decade but about nine-tenths of the approximately 2 million research papers that appear every year are still published behind a paywall.

Part of the reason is scientists' reluctance to abandon traditional journals and the established ranking among them. Not all journals are equal they are graded by impact factor, which reflects the average number of times that the papers they publish are cited by others. Nature's impact factor is 36, one of the highest going, whereas Biochemistry's is around 3.2. Biochemistry is well regarded many journals have lower factors but a paper in Nature is still a much greater prize.

Unfortunately, it is prized for the wrong reasons. Impact factors apply to journals as a whole, not individual papers or their authors.

Despite this, scientists are still judged on publications in high-impact journals; funding and promotion often depend on it. Consequently few are willing to risk bucking the trend. This has allowed several publishers to resist calls to abandon the subscription model.

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Set science free from publishers' paywalls

Scientists discover how key enzyme involved in aging, cancer assembles

A model representing the interaction of the p65 protein with telomerase RNA. The RNA backbone of telomerase (multicolored) is shown interacting with three different parts of the p65 protein (shown in gold, blue, and light green). Credit: Mahavir Singh, Juli Feigon/UCLA Chemistry and Biochemistry

(Phys.org) -- UCLA biochemists have mapped the structure of a key proteinRNA complex that is required for the assembly of telomerase, an enzyme important in both cancer and aging.

The researchers found that a region at the end of the p65 protein that includes a flexible tail is responsible for bending telomerase's RNA backbone in order to create a scaffold for the assembly of other protein building blocks. Understanding this protein, which is found in a type of single-celled organism that lives in fresh water ponds, may help researchers predict the function of similar proteins in humans and other organisms.

The study was published June 14 in the online edition of the journal Molecular Cell and is scheduled for publication in the print edition on July 13.

The genetic code of both the single-celled protozoan Tetrahymena and humans is stored within long strands of DNA packaged neatly within chromosomes. The telomerase enzyme helps create telomeres protective caps at the ends of the chromosomes that prevent the degradation of our DNA, said Juli Feigon, a UCLA professor of chemistry and biochemistry and senior author of the study.

Each time the cell divides, the telomeres shorten, acting like the slow-burning fuse of a time bomb. After many divisions, the telomeres become eroded to a point that can trigger cell death.

Cells with abnormally high levels of telomerase activity constantly rebuild their protective chromosomal caps, allowing them to replicate indefinitely and become, essentially, immortal. Yet undying cells generally prove to be more of a curse than a blessing, Feigon said.

"Telomerase is not very active in most of our cells because we don't want them to live forever," said Feigon, who is also a researcher at UCLA's Molecular Biology Institute and a member of the National Academy of Sciences. "After many generations, DNA damage builds up and we wouldn't want to pass those errors on to subsequent cells."

Overactive telomerase has potentially lethal consequences far beyond the propagation of erroneous DNA. The enzyme is particularly lively within cancer cells, which prevents them from dying out naturally. Finding a way to turn off telomerase in cancer cells might help prevent the diseased cells from multiplying.

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Depth of the Field

Linda McCormick, a pollution-prevention expert with a biochemistry degree from UC Berkeley, said recycling was not a priority at the University when she first became a resource conservation manager for the UNM Recycling Program in 2003.

McCormick said she is proud to watch the program grow, and that UNM recycled 125,000 tons of material last year. McCormick said the recycling program includes eight staff members who pick up recyclable materials from all over campus every day. She said staff members separate the recyclable materials into different categories to put into bales, which are then sold to a range of recycling companies. She said the program helps the University save a lot of money on trash disposal.

McCormick said the program utilizes a lot of unused items from other departments. She said the program reuses trash bins from Athletics, which adds a great component to the recycling program.

The UNM Recycling Program welcomes students, staff and faculty members to drop off recyclable trash at their location next to Tucker Avenue and Camino del Servicio on North Campus.

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Depth of the Field

Link between vitamin C, twins can increase seed production in crops

A boost of vitamin C results in the production of twin seedlings of tobacco. Credit: Gallie Lab, UC Riverside

Biochemists at the University of California, Riverside report a new role for vitamin C in plants: promoting the production of twins and even triplets in plant seeds.

Daniel R. Gallie, a professor of biochemistry, and Zhong Chen, an associate research biochemist in the Department of Biochemistry, found that increasing the level of dehydroascorbate reductase (DHAR), a naturally occurring enzyme that recycles vitamin C in plants and animals, increases the level of the vitamin and results in the production of twin and triplet seedlings in a single seed.

The value of the discovery lies in the potential to produce genetically identical seedlings and increase production of high-value crops.

"The ability to increase fertility can be extremely useful when the inherent rate of fertility is low or the value of the crop is great, such as corn in which the production of multiple embryos would significantly boost its protein content," Gallie said. "The extra seedlings per seed may also enhance per-seed survival chances for some species."

Study results appear in the online international journal PLoS ONE.

Just as in humans, twins in plants can be either genetically identical or fraternal. Gallie and Chen discovered that the twins and triplets produced in tobacco plants when vitamin C was increased were true twins or triplets as they were genetically identical.

In the lab, the researchers went on to show that injecting plant ovaries with vitamin C was sufficient to produce twins or triplets and that the vitamin causes the zygote, the fertilized egg, to divide into two or even three fertilized egg cells before these cells proceed through subsequent stages of development to produce twins or triplets.

Although they used tobacco in their research, Gallie predicts vitamin C could generate twins and triplets in other plants as well.

"Because the early stages of embryo development are so conserved among plant species, we expect that vitamin C will have a similar effect in almost any plant," he said.

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Link between vitamin C, twins can increase seed production in crops

Miss Davis County crowned Miss Utah 2012

Kara Arnold, Miss Davis County, was crowned Miss Utah 2012 on Saturday night at the Capitol Theater in Salt Lake City.

Arnold, of Bountiful, is a biochemistry major at the University of Utah and was recently accepted into the universitys medical school. Along with the title she won Saturday, she will receive a $10,000 scholarship to help her toward her goal of becoming a physician. She received a preliminary award for academic excellence, which is sponsored by and decided upon by the Miss America organization.

During her reigning year, Arnold will travel the state promoting her chosen platform "Discover Your Potential Step Up with STEM," serving as an ambassador for the Childrens Miracle Network Hospitals. She will also be the official spokeswoman for the Child Protection Registry, which is dedicated to protecting Utah families from adult-oriented solicitations.

First runner-up was Miss Duchesne County, Brittani Reinhardt; second runner-up was Miss Pioneer Valley, Ciera Pekarcik; and third runner up was Miss Orem, Hannah Harkness. All will receive varying amounts of scholarship money.

Copyright 2012 The Salt Lake Tribune. All rights reserved. This material may not be published, broadcast, rewritten or redistributed.

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Miss Davis County crowned Miss Utah 2012