DNA clues catch more criminals

A man allows police to take a DNA sample. Source: AFP

DNA technology now plays a key role in more than half of arrests and reports from crime scenes, as the number of people on the database grows.

Last financial year, DNA from crime scenes contributed to an arrest or a report in 52per cent of cases, up from 48per cent the previous year, reflecting an improvement in forensic science and crime scene investigation practices.

The South Australian Police annual report tabled in Parliament yesterday showed 97,396 suspects or offenders had samples entered on the DNA database, up from 84,629 in 2010-11.

While scientific work increasingly helps solve crimes, so does intelligence work.

During 2011-12 the Crime Gangs Task Force - which deals with organised crime and outlaw motorcycle gangs - arrested or reported 89 motorcycle gang members and 92 associates; seized 1175g of amphetamine, 130 cannabis plants, 5319g of cannabis, 165 ecstasy pills, 927 street deals of other illicit drugs; $139,000 in cash, 29 firearms and issued 42 barring orders.

Police Commissioner Gary Burns said victim-reported crime continued to drop, falling 5.6per cent in the past financial year (to 125,879 incidents) and 40.5per cent since 2000-01.

Other highlights in the report include:

18,534 reports received by Bank SA Crime Stoppers, resulting in 2066 crimes solved, 1166 suspects apprehended and $261,645 worth of property and cash recovered;

563,594 driver screening tests conducted, including 42,312 drivers tested for drug driving, 7779 cars impounded or clamped for hoon driving (compared to 7303 in 2010-11).

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Posted in DNA

Producers embrace sheep DNA testing

AUSTRALIA'S sheep producers are queuing up to adopt new DNA technology, with the latest Sheep Genomics Pilot Project fully subscribed.

The DNA testing program, conducted by the Co-operative Research Centre for Sheep Industry Innovation (Sheep CRC), was booked out within days of its opening in August.

The Genomics Pilot Project offers three DNA testing programs: a SNP test for parentage at $17/test; a SNP test for Merino poll/horn for $17/test; and the 50k SNP test for prediction of genomic breeding values for sires at a cost of $50/test. Merinos tested for parentage, or with the 50k SNP, are receiving the poll test results at no additional cost.

The 1500 genotyping tests available as part of Pilot Project III have been fully subscribed, and a further 1500 tests allocated for commercial scale trials has also been over-subscribed, Sheep CRC chief executive James Rowe said.

With the use of DNA analysis and genomic breeding values being a very new technology, R&D is occurring in parallel with the Genomics Pilot Projects in order to define the most effective use of the new technologies in practical breeding programs.

"For this reason, the CRCs genetics research team will be working closely with a group of nine commercial-scale breeders who have submitted expressions of interest.

This is a resounding vote of confidence in the commercial value of genomics technology for sheep breeding programs.

The Sheep CRC has conducted a Genomics Pilot Project yearly since 2010, with the number of rams tested each year increasing dramatically, from approximately 450 rams in 2010, to 860 rams in 2011 and now 3000 rams in 2012.

This years project will build on the earlier trials, which provided genomic predictions for new traits including dressing percentage and lean meat yield, together with traits for meat eating quality such as intramuscular fat and shear force that are difficult and expensive to measure.

It is expected that the accuracy levels of research breeding values (RBVs) and Australian Sheep Breeding Values (ASBVs) will further improve as a result of the additional data collected during the Genomics Pilot Project and through the Information Nucleus program.

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Posted in DNA

The Military Put Out A Research Request For What Amounts To Cybernetic Organisms

In a request released Sept. 14 of this year, the Office Of Naval Research sought to find proposals for "Synthetic Biology Tools for Sensing and Bioprocessing" essentially hybrid, organic inorganic "sensing" robots.

But the language can be deceiving.

Googling the first three words synthetic biology tools yields research in the field of Biofuels. Even the "bioprocessing" part of the request equates to sources of "efficient" fuels in austere conditions. As we've covered most recently, the military is under tremendous pressure to curb its consumption of traditional fossil fuels.

Along with that, it's under even more pressure to reduce casualties on the battlefield arguably the number one metric aside from monetary cost which affects public resistance to foreign military expeditions.

Sure, they're looking for inexpensive, efficient means to fuel war, but they're also looking for more efficient vehicles of war.The language farther in the proposal though makes it clear that the military is investing heavily into smart, cybernetic robots.

From the proposal:

This field is intended to serve two purposes: (1) to allow the design and engineering of organisms that possess a specific, reproducible function from a set of validated genetic parts, circuits and chassis organisms, and, (2) to allow the systematic study of the structure and function of genetic components in natural cellular/multi-cellular systems.

Interpretation: We're looking to connect organic matter, be it single celled or multi-celled, to inorganic, possibly synthetic, circuits.

The organic matter would 'sense' certain stimuli. In one case specifically, chemicals or molecules in the air that would indicate bomb-making materials kind of like a dog's nose connected to a computer.

But then the proposal takes a nasty turn for the weird and scary:

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The Military Put Out A Research Request For What Amounts To Cybernetic Organisms

Metabolic melodies

Prof. Kevin Aherns musical lilt to his biochemistry lectures is a hit with Oregon State students

Its a Tuesday morning, and Kevin Ahern is entertaining a room full of college students in an introductory class to biochemistry and biophysics with a voice that carries and a lesson that is positively lyric.

The class is full of young students, many of them in the second week of their first year of college. They have many reasons to be nervous; their course work is among the most difficult at the university. But Ahern, a senior instructor of biophysics and biochemistry at Oregon State University, has found a way to calm jittery.

Music.

After brief announcements and role call during which Ahern proves that he knows his class of about 50 students by name and face he projects song lyrics on an overhead screen that contain words like ribosome and DNA.

Then, without hesitation, he begins to sing the scientific lyrics to the melody of America, the Beautiful and the class follows his lead.

This is Metabolic Melodies, one of Aherns unconventional teaching methods to cut through the anxiety that new students often feel when first entering his class.

Ahern, who jokingly claims the title of frustrated musician, began writing the melodies in 1990.

I originally conceived of the melodies because biochemistry itself is a pretty scary subject for students, he said.

Metabolic Melodies have made a big enough impression on the student population that Ahern often has students enrolling in his courses because of the songs.

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Realizing the potential of stem cell therapy

Public release date: 15-Oct-2012 [ | E-mail | Share ]

Contact: Kat Snodgrass 202-962-4090 Society for Neuroscience

NEW ORLEANS New animal studies provide additional support for investigating stem cell treatments for Parkinson's disease, head trauma, and dangerous heart problems that accompany spinal cord injury, according to research findings released today. The work, presented at Neuroscience 2012, the annual meeting of the Society for Neuroscience and the world's largest source of emerging news about brain science and health, shows scientists making progress toward using stem cell therapies to repair neurological damage.

The studies focused on using stem cells to produce neurons essential, message-carrying cells in the brain and spinal cord. The loss of neurons and the connections they make for controlling critical bodily functions are the chief hallmarks of brain and spinal cord injuries and of neurodegenerative afflictions such as Parkinson's disease and ALS (amyotrophic lateral sclerosis), also known as Lou Gehrig's disease.

Today's new findings show that:

Other recent findings discussed show that:

"As the fields of developmental and regenerative neuroscience mature, important progress is being made to begin to translate the promise of stem cell therapy into meaningful treatments for a range of well-defined neurological problems," said press conference moderator Jeffrey Macklis, MD, of Harvard University and the Harvard Stem Cell Institute, an expert on development and regeneration of the mammalian central nervous system. "Solid, rigorous, and well-defined pre-clinical work in animals can set the stage toward human clinical trials and effective future therapies."

###

This research was supported by national funding agencies such as the National Institutes of Health, as well as private and philanthropic organizations.

Todd Bentsen, (202) 962-4086

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Definiens closes funding round for digital pathology expansion

Definiens, a Munich-based developer of image analysis techniques and specialists in the growing field of digital pathology, recently closed a private funding round worth 10 million.

The funds will primarily be used for commercial expansion of its current business, as well as development and commercialization of products for use in clinical digital pathology procedures.

Gilde Healthcare Partners, a new investor, led the funding round, which also saw participation from existing investors and Definiens management.

Digital pathology involves the acquisition, management, and interpretation of pathology information generated from digitized tissue specimens and scanned microscopy images. As pathologists embrace digital workflows, digital pathology is rapidly becoming an essential technology for increasing productivity and improving treatment decisions and patient care, according to Definiens.

"Digitization of data is increasing across the whole field of medicine," noted Markus Rinecker of Definiens speaking to Optics.org. "Most pictures in radiology are digitized; MRIs and CT scans all are digital; the same is becoming true for the patient records and other kinds of visual information. Pathology has been one of the remaining 'analog islands'."

One reason for that has been the formidable demands on the hardware involved, since digitizing pathology images with a high enough resolution to allow meaningful analysis leads to very large files.

"The images can be enormous, with single files in the gigapixel or gigabyte arena," agreed Rinecker. "And you are unlikely to have one single picture per patient, so a patient's complete data set can easily total 1 terabyte of data. This is one reason why the field has taken a long time to evolve. Only in the last three years or so have digital scanners able to perform the task become available, from vendors such as Leica and Hamamatsu. Philips has introduced its own scanner, GE is likely to do the same and are investing heavily in the field, so big companies are starting to chase this market."

A developing value chain Once adequately scanned pathology images are available, whether from standard or confocal microscopy or other sources, Definiens digital pathology image analysis is designed to detect regions of interest. These can include specific morphologies, rare events, cells, and sub-cellular components.

"Our approach is completely different from our competitors," said Rinecker. "We analyze the pictures in a similar way to how a human being would look at it, examining objects in context, rather than strictly looking for pixels and patterns and matches. This makes the image analysis much more robust, and Definiens holds patents relating to this approach."

Cancer diagnosis is a particular focus, and an area singled out for mention in the announcement of the recent funding. "Digital Pathology combined with the right image analysis tools has the potential to transform cancer diagnosis," commented Janke Dittmer, partner at Gilde Healthcare Partners, at the time. Dittmer has now joined Definiens' supervisory board following the investment round.

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Definiens closes funding round for digital pathology expansion

Matrix Nutrition Discover the Secret to Restoring Damaged Muscle

Due to a recent study Matrix nutrition have now discovered a new secret that aids recovery after intensive exercise and rebuilds cells. This new information confirms their beliefs on the importance of vitamins when learning how to build muscle through weight gainer supplements.

(PRWEB UK) 15 October 2012

The study was conducted by scientists from the University of Kent who made an alarming discovery as they uncovered the process in which one of the most coveted vitamins, B12, is produced in human cells.

As B12 plays a crucial role in our health on a daily basis this new information is set to change the way medicine works. B12 is an essential vitamin for anyone undergoing exercise or weights training as decencies of the vitamin are associated with disorders of the cardiovascular system.

Martin Warren led the group and it was his systematic plan that allowed students to observe the construction of B12 in bacteria. Forming a series of molecular machines on a conveyor belt, he was able to vary the length of the line of assembly revealing how this crucial vitamin is manufactured.

However it was after this process that the real revelation was revealed, one that may change the way we treat patients of cancer and other life threatening illnesses. The student team did not only observe but also tampered with the structures and found that they could alter the way the vitamin is made. This breakthrough hopes to utilize these new forms of the vitamin to use in drugs to fight TB and cancer.

Professor Warren said, this is a really important step forward. Vitamin B12 is a nutrient that is only made by bacteria and is not present in plants. Therefore a significant proportion of the world's population, including vegetarians, are at risk of B12 deficiency. Our work will assist in the generation of better ways of making more of this vitamin available and is also permitting us to make new compounds that will literally allow us to throw a spanner in the works of infections such as TB and diseases such as cancer.'

Adam Latham the owner of Matrix Nutrition is pleased that the supplements he sells include this vitamin, he says, weve always understood the importance of B vitamins in our products as they not only help with restoration and recovery of the body after intensive exercise they also have mood enhancers that are essential when training is getting a little tough or when trying to lose weight. The majority of our protein shakes UK Manufactured contain a unique blend of vitamins and minerals that support the immune system and help to repair the body the natural way.

For more information please visit http://www.matrixnutrition.com

Matrix Nutrition is the first choice for body builders and those looking to lose weight. They provide a range of supplements and protein powders to increase energy, help lose weight, increase muscle and to support the body through intensive training. Matrix Nutrition has a very simple mission plan: To provide effective sport supplements at an affordable price. While it is common knowledge the price off raw materials within the nutrition industry is rising (i.e. whey protein) we will do our utmost to keep Matrix Nutritions products some off the most affordable on the market. While other companies may take advantage of these rising costs to inflate their prices even more we will not.

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Nutrition Point enhances EDI efficiency with Kewill

Nutrition Point, a leading supplier of gluten free products, has selected Kewill, a leading provider of solutions that simplify global trade and logistics, to provide a fully integrated Electronic Data Interchange (EDI) system, to improve its order and invoicing processes.

Nutrition Point has already seen cost savings on processing orders more quickly by using Kewill MessageBroker since its go live in October 2008. The new system enables employees to focus more on customer service as it does not require the manual re-entry of order and invoice details.

As an end-to-end managed B2B integration service, maintained on a 24/7/365 basis, Kewill MessageBroker gives Nutrition Point more visibility over the process as notifications are received via email to confirm an order has been received.

The company chose Kewill MessageBroker because of its ability to connect, convert and control data in any format, through any communication channel.

Mehdi Barani, Systems Development Analyst, Nutrition Point, commented, After the implementation of a new ERP system, we decided that it was time to review our EDI processes. We already had a good working relationship with Kewill, as we previously used their client-side EDI solution, EasyTrade, to trade with partners. However, we required an outsourced, hosted system which had the ability to integrate into Navision. Kewill was able to supply a fully managed EDI service with seamless integration and the ability to process our orders and invoices quickly and efficiently.

Jacquie Boast, European Chief Operating Officer for Kewill commented, Nutrition Point is experiencing the efficiencies from using Kewills MesssageBroker solution with immediate effect, demonstrating the quick ROI we deliver to our customers. Their order process has been streamlined, freeing up users time to enhance customer service which in todays economic climate is a key measure of customer satisfaction and retention

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MPs weigh-in on Nutrition North

It has been two weeks since the Nutrition North program came into full effect and Members of Parliament from various parties are weighing in on how it's working.

As of Oct. 1 the list of foods eligible for air freight subsidies shrunk. Items such as canned fruits and vegetables, dry pasta and rice are no longer covered.

Interim Liberal leader Bob Rae visited a grocery store in Kuujjuaq, Quebec last week. He said too many family staples are no longer covered by the subsidy.

Well its pretty astronomical. I think people in the south just dont get it if you dont see it for yourself, Rae said.

The government I think is trying to present it as sort of a nutrition program, but really its more about price and affordability and about the cost of living. Rather than the nanny state telling people, well well cover this food but we wont cover that food.

New Democrat MP Romeo Saganash wants all stakeholders government, retailers and consumers to work together.

The Prime Minister needs to call a summit so that everybody can sit down [and] discuss this and see how we can fix this problem once and for all, Saganash said.

The parliamentary secretary for Aboriginal Affairs and Northern Development, Conservative Greg Rickford, said the government wants to make sure people understand the program first. Then, Rickford says, the program is designed to be flexible and change with conditions over time.

Nutrition North representatives say that since the new program started the price of a northern food basket dropped by eight per cent. Rickford is not sure when the first annual report from the Nutrition North advisory board will be released.

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Creative Edge Nutrition, Inc. Acquires Chesapeake Nutraceuticals

MADISON HEIGHTS, Mich., Oct.15, 2012 /PRNewswire/ --Creative Edge Nutrition, Inc. (FITX), a nutritional supplement company focusing on active lifestyles, announced today the details and name of the acquisition ofChesapeake Nutraceuticals http://www.chesapeakenutraceuticals.com, from August 20, 2012 press release. Chesapeake Nutraceuticals was a wholly owned subsidiary of SCD Enterprises, a vertically integrated nutritional supplement holding company. Chesapeake Nutraceuticals (Chesapeake) is a premier supplement brand geared towards providing the nutritional support necessary for the aging who strive to increase their quality of life through proactive nutrition.The entire product line is specially formulated based on the science provided by elite U.S. and International Medical Institutions. Dr. Ron Blankstein, who has been practicing for over 30 years (Dr. Blankstein is Board Certified in both Internal and Cardiovascular Medicine), plays an important role in the formulation of this product line. Chesapeake has a customer base of 120,000 people and has delivered more than 10 million informational and product news letters to its target market.

"Chesapeake Nutraceuticals, like http://www.ScienceDefinedNutrition.com, http://www.scifitauthentic.com and http://www.cenergynutrition.com, are brands that truly bring a measured benefit to those who take them. We look forward to growing these brands within our current and new distribution networks both domestic and international. We will continue to aggressively grow and expand our presence in the sports nutrition marketplace through both organic growth and strategic acquisitions like this one," stated Bill Chaaban, Creative Edge Nutrition's CEO and President.

A complete list of our acquisitions:

About http://www.chesapeakenutraceuticals.com

Chesapeake Nutraceuticals provides premium grade supplements to aging Americans. Their products are formulated in conjunction with the latest research from elite U.S. and International Medical Institutions. Please visit our site at http://www.chesapeakenutraceuticals.com

About http://www.supplementstogo.com

http://www.Supplementstogo.com is one of the leading online retailers in the market today for discount supplements. The Company focuses on leading edge products that produce the best results for their customers with superior pricing and delivery costs than the competition. Please visit our site at http://www.Supplementstogo.com

About http://www.a-z-nutrition.com

A-Z-Nutrition.com is one of the best known e-tailers of discount nutritional supplements. The Company has served its customers for over a decade by providing quality products at the best prices around. Please visit our site at http://www.a-z-nutrition.com

About Science Defined Nutrition, Inc. http://www.sciencedefinednutrition.com

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Creative Edge Nutrition, Inc. Acquires Chesapeake Nutraceuticals

HCCC’s renovated science labs ‘amazing’

Bonita Gibb hovered over a new microscope examining a piece of cardiac muscle. While the Herkimer County Community College student did not take science classes prior to construction of the $2.8 million laboratory renovation project, she is benefiting from the better organized, high-technology equipped, spacious and cheery classrooms at the college. Fifty percent of the cost of renovations was matched by the state, while the other half is being funded by donations. For about two weeks, students and faculty have enjoyed the refurbished science labs in the Edward Manning and Shirley Angar Gaynor Science Center. Last week, biology Professor Jennifer Herzog wrote on a white-painted portion of the wall which serves as a white board in the front of the microbiology lab as a few of her students analyzed microbes. Its amazing. Its so much more spacious, she said. Im finally able to get everything taught with students working in a safe environment. Herzog said students and faculty were impressed with the renovations, and noted she can see all her students as they work. We had the ahh factor when we opened the door, she said. During the planning process, faculty was asked for their opinions on what should be included in each of the specific labs microbiology, chemistry, biology, physics and anatomy. Each room is equipped with 24 stations. From new microscopes, computers and touch-screen televisions to clear cabinets for easily finding tools, the five labs were designed with everyone in mind. It was everything I asked for down to the pull-out drawers, Herzog said as she pulled a wooden slab hidden within one of the stations. The new labs also means the college will be able to offer more classes as well as new programs down the line, said Henry Testa, associate dean of academic affairs for business, health, science and technology. Down the hall, physics and astronomy Professor Faith Thompson said her request was for plenty of outlets. Plenty, where theyre not dangerous, she said, noting the stations are large enough to fit the equipment now and dont bulk under the weight. Theyre stable for vibrations, Thompson said. Second-year student Jennifer Canter, who sat in Thompsons lab room, said the old labs made it difficult to work in groups. Compared to the old labs, (these) are more functional and easier to get around in, she said.

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DNA evidence fails to convince jury of man’s guilt in 1983 killing

A retrial is expected in a San Francisco cold case murder in which DNA evidence failed to lead to a conviction Tuesday.

Just three of the 12 jurors believed there was enough evidence even after matching DNA samples to convict 48-year-old William Payne of strangling to death 41-year-old Nikolaus Crumbley while raping him in a car in John McLaren Park on Nov. 16, 1983.

On Wednesday, Deputy Public Defender Kwixuan Maloof, who represents Payne, said the hung jury proves that despite what we see on television, the presence of DNA does not prove a person is guilty of a crime.

But prosecutors appear determined to prove otherwise. Motions in Paynes retrial begin today, the Public Defenders Office said, with opening arguments scheduled for Oct. 22.

DNA evidence and independent corroborating testimony linked the defendant to the brutal rape and murder of Mr. Crumbely, District Attorney George Gascn said following Tuesdays outcome.

Payne was 19 years old when Crumbleys body was found facedown at the intersection of John Shelley Drive and Mansell Street. Prosecutors said Crumbleys pants and underwear were pulled down to his ankles.

Prosecutors believe Payne killed Crumbley while the two were having sex in Crumbleys rental car, which was later found in Oaklands Lake Merritt.

Three years ago, cold case investigators tied DNA found in Crumbleys rectum to Payne, whose DNA had been entered in a criminal database after he assaulted a woman in 1984.

In January, Payne was charged with first-degree murder during the course of sodomy.

But the DNA evidence wasnt enough to convince nine jurors of Paynes guilt.

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DNA evidence fails to convince jury of man’s guilt in 1983 killing

Posted in DNA

RainDance Technologies and Integrated DNA Technologies to Develop Reagents and Consumables for Digital PCR

LEXINGTON, Mass. & CORALVILLE, Iowa--(BUSINESS WIRE)--

RainDance Technologies, Inc., the Digital Biology Company, and Integrated DNA Technologies (IDT) Inc., the world leader in oligonucleotide synthesis, today announced a collaboration focused on consumables specifically tailored to perform the fast-growing application of digital PCR. Under the terms of the agreement, the companies will work together on the development of reagents compatible with the RainDrop Digital PCR System. Financial terms of the agreement were not disclosed.

The RainDrop Digital PCR System is a breakthrough research platform that is transforming the performance of molecular assays by enabling digital answers across a number of important applications including low-frequency tumor allele detection, gene expression, copy number variation, and SNP measurement. Built using RainDances proven RainStorm picodroplet technology, the RainDrop System generates up to 10 million picoliter-sized droplets per sample. Since each droplet encapsulates no more than a single molecule, researchers can quickly determine the absolute number of droplets containing specific target DNA and compare that to the number of droplets with background, wild-type DNA.

We have achieved a new gold standard in sensitivity, quantitation and multiplexing through enhancements in every aspect of system and reagent refinement, said Rena McClory, Ph.D., Marketing Director for Digital PCR at RainDance Technologies. We are pleased to be working with market leaders such as IDT on the development and broad availability of best-in-class reagents in support of our new RainDrop Digital PCR System.

IDT is a leader in manufacturing and developing custom oligonucleotideproductsfor use in the research and diagnostic life science markets.This includesdesign and synthesis ofdual-labeled probes for gene expression and genotyping as part of the PrimeTime qPCR product family. Founded by Dr. Joseph Walder in 1987, IDTs development has been guided by an uncompromising approach to quality, a belief in the value of good service, and a determination to minimize consumer costs.

We are pleased to be working with RainDance in supporting scientists who are seeking to apply the powerful attributes of digital PCR to their research projects, said Stephen Gunstream, Senior Vice President of Marketing and Strategy at IDT. Digital PCR is redefining the science of directly quantifying and amplifying nucleic acids and will open the doors to an exciting era of new discoveries.

For more information about the RainDrop Digital PCR System, please visit http://www.RainDanceTech.com.

About RainDance Technologies

RainDance Technologies, the Digital Biology Company, is pioneering the use of high-throughput picodroplet-based analysis in human health and life science research. The company's core RainStorm technology generates millions of discrete droplets that can encapsulate a single molecule, cell or reaction and be digitally analyzed and sorted one at a time. The power, precision and simplicity of picodroplets enable researchers to answer complex questions with unprecedented sensitivity and quantitation. The complete RainDance solution includes automated instrumentation, customizable bioinformatics and high-value consumables and reagents for applications including targeted next-generation DNA sequencing, methylation, digital PCR. Based in Lexington, Massachusetts, the company supports scientists around the world through its international sales and support operations and a global network of distributors and service providers. For more information, please visitwww.RainDanceTech.com.

For research use only. Not for use in diagnostics procedures.

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RainDance Technologies and Integrated DNA Technologies to Develop Reagents and Consumables for Digital PCR

Posted in DNA

Leonard Lerman, 87; senior lecturer at MIT researched DNA

Using tools he often had made himself, Leonard Lerman took great care in making precise measurements during experiments he performed to further the understanding of DNA.

A simple way to state it is that he was a deeply quantitative man, said Tom Maniatis, chairman of the biochemistry and molecular biophysics department at Columbia University, who had worked with Dr. Lerman as a graduate student at Vanderbilt University.

Discoveries he made about what can unwind the strands of DNA, and other research throughout his career, helped Dr. Lerman become a key figure in the field of molecular biology.

He was both a deep and brilliant man, and also a clever man, in the sense that he always had great ideas and techniques, Maniatis said.

Dr. Lerman, formerly a senior lecturer at the Massachusetts Institute of Technology, died Sept. 19 in his Cambridge home of a chronic neurological disease. He was 87.

He did lots of things that served for the increased understanding of the structure of DNA and the things that interacted with DNA, said Maurice Fox, a professor emeritus of molecular biology at MIT.

Dr. Lerman, Maniatis said, saw the world through mathematics and could use mathematical and physical properties of molecules to predict what would occur.

As a graduate student at the California Institute of Technology, Dr. Lerman worked with Linus Pauling, who in 1954 was awarded the Nobel Prize for chemistry and has often been referred to as one of the founders of molecular biology.

Dr. Lerman set out to prove his hunch that antibodies have two binding sites to bond with antigens, which are any foreign substances that prompt an immune response. After achieving that goal, he graduated from Cal Tech with a doctorate in chemistry in 1950 and went on to join the faculty of the University of Colorado.

The 1950s were an active time for DNA research. Dr. Lerman was determined to find out more about chemicals that attach to DNA strands and make them unwind, often causing mutations. The way certain chemicals attach to the strands is called intercalation, and it occurs between adjacent base pairs in double-stranded DNA.

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Leonard Lerman, 87; senior lecturer at MIT researched DNA

Posted in DNA

The Future of DNA Sequencing Isn't in the Lab

Up until now, the money Illumina (Nasdaq: ILMN) , Roche, Life Technologies (Nasdaq: LIFE) , and Pacific Biosciences of California (Nasdaq: PACB) have made selling DNA sequencers has come from research labs. Academics need DNA sequencers to do basic research to understand how genetic variation affects biologic processes.

That basic research has translated into the clinic at an alarming rate, producing the next generation of DNA sequencing demand.

You can see it in the acquisitions Roche's bid for Illumina appeared to be mostly driven by bringing sequencing to the clinic. Roche has a strong hold in diagnostic testing, and Illumina's sequencing technology is superior to Roche's. But Roche played hardball and didn't want to overpay for the technology.

Last month, Illumina decided it could fill some of the gap on its own, purchasing BlueGenome, a leader in cytogenetics. The company sells tests that look at the DNA to identify genetic abnormalities that lead to cancer and other issues. Currently, those abnormalities are identified by binding probes to the DNA to identify duplications and fusion of chromosomes, but we're not too far off from where cancer patients just routinely get their DNA sequenced to identify the abnormalities.

Blue Genome also has a test to look for abnormalities before in vitro fertilization. Sequencing might be harder there, because of less DNA, but these issues are often overcome eventually.

It sure looks to me like Illumina bought BlueGenome more for its ability to sell and run the clinical test than for the test themselves, which may be obsolete in a few years given the rapid decrease in the cost of sequencing. We will get to the point where running individual tests like Sequenom's (Nasdaq: SQNM) MaterniT21 PLUS will be silly because the entire genome can be analyzed for the same cost.

Diagnosing Earlier this month, Life Technologies hooked up with CollabRx (Nasdaq: CLRX) to use the company's interpretive analytics to help develop tests for cancer diagnostics. CollabRx combines a patient's data from multiple sources to help the doctor develop a treatment plan. The genotype of a tumor tells you a lot about what drugs might be able to kill the tumor, but the genetic variation still needs to be taken in context with other pieces of information.

Getting the sequence and knowing what to do with it are two different things. One startup sequencing company, Knome, has begun selling a $125,000 supercomputer, so hospitals can analyze patients' DNA sequences directly. Having the process in-house might speed up diagnosis, but the appeal seems to also be about avoiding confidentiality issues for the patients when the data is shared externally. Either way, the fact that hospitals are buying the station is a sign that they see a future in using patients DNA sequences when diagnosing patients.

On the cusp (still) We've been on the verge of pushing genomics into diagnostics for years. Illumina added a new division for diagnostics back in 2008. Four years later, we're further along, but we're still a ways away from where DNA sequencing is a mainstream test done by most doctors.

The limiting factor is a combination of usefulness and cost, both of which are headed in the right direction. We're learning more about how genetic variations affect patients' physiologies. And the discoveries are accelerated as more people get their genomes sequenced.

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Posted in DNA

DNA will play pivotal role in Ridgeway case

DENVER - DNA evidence will almost certainly play a pivotal role in the ongoing investigation into the murder of Jessica Ridgeway, but a noted DNA expert cautions it can also potentially lead investigators down a rabbit hole.

Take the backpack that was found shortly after Jessica Ridgeway was reported missing as an example. It was found in a neighborhood in Superior.

"What if some kid sneezed on [Jessica's] backpack during recess [at her school]? Then we're focusing all of our efforts on this, and when we don't find that person we then think we haven't found the killer," Dr. Elizabeth Johnson told 9News from her California home on Monday.

Dr. Johnson has more than 20 years of experience working in the field of DNA technology. She was called by the defense to testify during the Kobe Bryant case in Colorado. She currently works in private forensic consultation.

"I think the biggest misconception about DNA technology is that it is infallible and that there are never mistakes made," she said. "Just because you someone's DNA on an object doesn't make them guilty of a criminal act."

Of course, she said, the presence of particular bodily fluids can also be indicative of a criminal act, and thus lead investigators closer to a killer. But she cautions that CSI-like television shows have raised the expectations of many people in inappropriate ways.

Dr. Andrew Bonham is a professor at Metropolitan State University and says he still believes DNA will help in the Ridgeway murder investigation.

"I am almost 100 percent convinced," the molecular biology expert said. "That (the killer) is going to leave traces of DNA behind and that investigators are going to find those traces."

He said that current technology allows investigators to collect even seemingly miniscule portions of bodily fluids in an effort to identify critical DNA markers.

"We're now talking about almost less than you can perceive," he said.

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DNA will play pivotal role in Ridgeway case

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BVU students present research on environmental impact of Bt corn

Jennifer Heim and John Killpack. /Photo submitted

The students were invited to share their findings at the North Central Chapter (NCC) Conference of the International Society of Wetland Scientists (SWS) in Chesterton, Ind., in late September. Jennifer also earned a competitive travel grant to attend the conference and present their project, entitled, "Impact of Bt Corn Leaf Detritus on Aquatic Macroinvertebrates."

Jennifer developed the proposal for the project during the spring semester of her sophomore year. She chose the topic because she recognized its significance to agriculture and the health of freshwater systems.

"I've always been curious about anthropogenic effects on ecosystems, and when told to select a topic that I would be working on for three years, I knew I wanted to find something interesting that was currently impacting the environment and humans," says Jennifer. "I browsed current science journal articles and happened across one about the impact of Bt corn detritus on macroinvertebrate communities. I had heard of Bt corn before seeing that article, but didn't know much about it. After I read the article, I realized that this was something that could have serious impacts on freshwater systems near agricultural land."

Bt corn has been genetically altered to express the bacterial Bt toxin, which is poisonous to insect pests. In biology, detritus is non-living particulate organic material which can include the bodies or fragments of dead organisms. Aquatic macroinvertebrates are found in lakes, streams, ponds, marshes and puddles and help maintain the health of the water ecosystem by breaking down leaf detritus and other organic matter to perpetuate the cycling of nutrients and energy through the system.

John grew up on a farm and was relatively familiar with Bt corn and its effects on the environment. He had also previously completed an internship with the Missouri River Basin that gave him greater knowledge about macroinvertebrates and water quality. He was intrigued enough to get involved with Jennifer's project.

"When I heard that Jennifer was basing her project in these areas, I decided to join her and assist in the research project," John says. "Our hypothesis was that the presence of Bt corn leaves as a food source for aquatic macroinvertebrates will show negative environmental effects in lab and field testing when compared to non-Bt corn leaves. In our research, we found negative survivability effects on tricopteran macroinvertebrates when comparing results from Bt corn leaves verses non-Bt-corn leaves."

The research project allowed John to obtain experience in a field-based project in order to assist in his decision to pursue ecological research or a human health direction after he graduates from BVU in the spring.

Beyond the results of the research, Jennifer also learned about enduring the challenges and trials of her project.

"One of the most important things I've learned is patience and acceptance that not everything is going to work out the way you want it to on your first try," Jennifer says. "This was research, not a controlled lab exercise. With that, you're going to have to go through a lot of trial and error for things to work, and even then you cannot always expect to get the results you want to see."

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BVU students present research on environmental impact of Bt corn

Einstein establishes the Paul F. Glenn Center for the Biology of Human Aging Research

Public release date: 15-Oct-2012 [ | E-mail | Share ]

Contact: Kim Newman sciencenews@einstein.yu.edu 718-430-3101 Albert Einstein College of Medicine

October 15, 2012 (BRONX, NY) Albert Einstein College of Medicine of Yeshiva University has received a $3 million grant from the Glenn Foundation for Medical Research to establish the Paul F. Glenn Center for the Biology of Human Aging Research. The grant will fund research to translate recent laboratory and animal discoveries into therapies to slow human aging.

Aging contributes to many of the debilitating and costly diseases including cancer, cardiovascular disease and diabetes that burden the United States and many other countries. This complex but universal condition causes individual cells and the body as a whole to decline in function. Finding the mechanisms that underlie the aging process may lead to treatments that slow aging, prevent or limit common diseases, and allow people to live healthier, longer lives.

"Unless we find protective mechanisms to delay aging, we will not make progress against age-related diseases," said Nir Barzilai, M.D., co-director of the new center as well as director of the Institute for Aging Research, the Ingeborg and Ira Leon Rennert Chair in Aging Research, and professor of medicine and of genetics at Einstein. "With this valuable grant from the Paul F. Glenn Foundation, we hope to make significant advances toward understanding the aging process and improving human health."

"The generosity of Paul F. Glenn and his foundation is a welcome shot in the arm for aging research in the United States, which is chronically underfunded," said Jan Vijg, Ph.D., co-director of the new center, the Lola and Saul Kramer Chair in Molecular Genetics, and professor and chair of genetics and professor of ophthalmology and visual sciences at Einstein. "This grant will help Einstein to maintain its position as one of the world's leaders in this rapidly growing field."

"Paul F. Glenn has been a visionary in aging research for more than 30 years," said Ana Maria Cuervo, M.D., Ph.D., co-director of the new center, the Robert and Rene Belfer Chair for the Study of Neurodegenerative Diseases, and professor of developmental and molecular biology, of anatomy and structural biology and of medicine at Einstein. "Some of us got to know him when we were still graduate students and he came to scientific conferences to see the data as it was being developed. Paul's personal approach to science has made a big difference to many of us in the field of aging research and has contributed to the career development of many young investigators."

The funding, in the form of pilot and feasibility study grants, is targeted to several specific research projects: uncovering the genetic and epigenetic mechanisms that protect humans against aging and age-related diseases, testing the effectiveness of the first-generation pro-longevity therapies, and developing novel preventive and therapeutic interventions against cellular aging in humans.

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Drs. Barzilai and Cuervo are also co-directors of Einstein's Institute for Aging Research and, together with Dr. Vijg, of the Nathan Shock Center for the Basic Biology of Aging. Both centers are funded by the National Aging Institute, part of the National Institutes for Health.

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Einstein establishes the Paul F. Glenn Center for the Biology of Human Aging Research

Obama, Romney have ways to make you vote

(Crown Publishing Group) - The Victory Lab by Sasha Issenberg.

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Chris Cillizza

How did the late-night comedy show see the vice presidential debate?

Turnout is where precision targeting really works, says Sasha Issenberg, author of The Victory Lab: The Secret Science of Winning Campaigns. Political scientists are using the tools of behavioral economics and behavioral psychology to understand why people vote and how to enforce that habit; campaigns are building voting scores for people in their databases like the financial industry builds credit scores.

Does it work? More than 1.1 million people already have voted, according to early voting statistics collated by George Mason University political scientist Michael McDonald, and plenty of them were prodded to do so without ever knowing it.

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Obama, Romney have ways to make you vote

Jacqueline Laurita of 'Real Housewives of New Jersey' Shares 'Ultherapy' Beauty Secret

ABC News' Juju Chang and Cathy Becker report:

Jacqueline Laurita lives a life in the spotlight.

As a star of the hit reality-TV show " The Real Housewives of New Jersey," the mother of three has been engaged in an on-air fight with former friend Teresa Guidice, a fight that most recently played out on the show's three-part reunion.

"It would just take a lot at this point," Laurita, 42, told "Good Morning America" of a possible reconciliation with her co-star and one-time friend. "It's hard. It's stressful."

Another thing Laurita can't reconcile is the concept of aging gracefully.

"I think that when people age gracefully, the people that age gracefully, it's because they can. Just for me, if I can fight it, I will," she said.

To deal, in part, with the reality of appearing on reality TV, Laurita admitted that she has tried many beauty approaches and treatments, including Botox, fillers and Fraxel laser.

The newest weapon in Laurita's fight is called "Ultherapy," a noninvasive skin treatment that uses ultrasound to lift, tone and tighten loose skin.

RELATED: Can you stop the clock with preventive Botox, thermage treatments?

Dr. William Song, an aesthetic medicine specialist at Omni Aesthetics in Oakland, N.J., performs the procedure for Laurita. He told "GMA" that the procedure was one of his favorite anti-aging therapies. And there's zero downtime.

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Jacqueline Laurita of 'Real Housewives of New Jersey' Shares 'Ultherapy' Beauty Secret