Anatomy Of Running Focuses On Biomechanics Of The Body

August 13, 2012

Lawrence LeBlond for redOrbit.com Your Universe Online

When it comes to modern era distance running, experts have mixed opinions: some say humans are born to run while others say our bodies need careful cross training to stay healthy. Jay Dicharry, author of the new book Anatomy for Runners, believes running alone cannot make you a better runner.

Running is typically a one-dimensional sport, said Dicharry, a physical therapist and the director of Biomechanics at Rebound Physical Therapy in Bend, Oregon. Youre basically just moving forward. Youre not really developing as a true athlete.

Because many people do not take training into mind when running, nearly a third get hurt every single year. When they read fitness magazines, they say I can do that. So they go out and do it, and then they get hurt and wonder why, said Dicharry. If we prepare ourselves well do a better job.

In his book, Dicharry focuses on identifying weaknesses, offers detailed tools for gait analysis, offers tips on preventing injuries, and explains how to exercise in a correct manner that aids the running body.

While many books focus on the cardiovascular system (engine) in regards to the runner, Dicharrys book focuses on the biomechanical body (chassis).

Coaches get lots of information on how to train the heart and lungs. But we dont get enough on how to keep the body healthy, he said. The more stable the chassis, the more efficient you can be. The book focuses on whats wrong and how to fix it.

Robert Forster, an expert in sports physical therapy in Santa Monica, California, said the human body has evolved to run.

Our tree-dwelling ancestors had shorter legs, longer arms and shorter feet. The body actually changed to be effective at running. But we lost our ability to co-opt that economy of motion, Forster, told Reuters by telephone from London, where he had been working with the US Olympic Track and Field team.

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Anatomy Of Running Focuses On Biomechanics Of The Body

Study: Tougher School Nutrition Laws Help Kids Lose Weight

Tougher laws regarding nutrition in schools have been implemented across the country. But are they working?

A new study says yes.

The study found that students who attend schools with tougher laws governing school food, such as prohibiting use of trans fats and getting rid of soda machines, are losing weight. The study, which looked at 6,300 students in 40 states, found that children overweight or obese in fifth grade were more likely to reach a healthy weight in the eighth grade if attending schools with strong nutrition laws.

Children in the study also gained less weight from fifth through eighth grades if they lived in states with strong, consistent laws versus no laws governing snacks available in schools.

In states with weaker laws, the percentage of overweight and obese children remained unchanged between those same grades.

In the study, laws were considered strong if they included specific nutrition requirements, such as limits on sugar and fats. Laws were rated weak if the requirements were vague and merely urged sales of "healthy" food without specifics.

The study took gender, race, income and school location into account.

The authors of the study, which was released online Monday in the journal Pediatrics, concluded that nutrition laws must be implemented across all grades in order to be effective.

Nutrition in school remains a hot-button issue, with some states resisting the notion of a "nanny-state," while many experts point at the rise of obesity in children as an indicator that the status quo cannot continue.

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Study: Tougher School Nutrition Laws Help Kids Lose Weight

New weapon against C. Difficile: significant scientific breakthrough at Université de Saint-Boniface

Dr Mathias Oul, Professor of Microbiology at Universit de Saint-Boniface led a team of scientists who have proven

WINNIPEG, Aug. 13, 2012 /CNW/ - A team of researchers from Universit de Saint-Boniface (USB) in Manitoba has proven the effectiveness of a disinfectant that could revolutionize the fight against superbugs in the hospital system.

The study led by Mathias Oul, Ph.D., microbiology professor at Manitoba's Universit de Saint-Boniface, shows that Akwaton tackles spore-forming bacteria, including Clostridium difficile whose heat-tolerant spores can live on surfaces for long periods of time and survive a number of years in a dry environment. The study has just been published in the UK's prestigious Journal of Medical Microbiology.

Most of the chemical disinfectants that are currently used control or prevent the spread of bacterial spores. However, the study shows that Akwaton is able to destroy Bacillus subtilis spores suspended in water and attached to stainless steel or glass surfaces, at very dilute concentrations, after just 90 seconds' treatment. Previous studies by the USB research team have shown that Akwaton is also effective against strains of Methicillin-resistant Staphylococcus aureus and Escherichia coli.

Dr. Mathias Oul explained Akwaton's main advantages: "Most disinfectants have to be applied at much higher concentrations - typically between 4 and 10% - which may be harmful to humans. Akwaton destroys spores at concentrations well below 1%." Akwaton is non-corrosive, non-irritating, non-toxic, odourless and environmentally safe. "All these properties make it an ideal disinfectant for hospitals and laboratories. It may also have great value in the food industry," said Dr. Oul.

"Universit de Saint-Boniface is proud to be a part of the ongoing battle against superbugs, the outbreaks of which are a threat to all hospitals and health care facilities in Canada and around the globe," said USB President Raymonde Gagn. "Dr. Oul's paper has already garnered a great deal of attention in Europe, and it will also undoubtedly generate considerable interest in Canada."

The paper titled "Akwaton, Polyhexamethylene-Guanidine Hydrochloride-Based Sporicidal Disinfectant: A Novel Tool to Fight Bacterial Spores and Nosocomial Infections" was published on August 8, 2012 in the scholarly Journal of Medical Microbiology.

The article and the press release issued by the UK-based Society for General Microbiology are available online at http://www.sgmjournals.org and on the USB website.

Universit de Saint-Boniface is Manitoba's only French-language postsecondary institution. Its research activities are primarily focused on francophone and Mtis cultural and identity issues; science; the environment and health; access to health care and social services in French; education; translation; and regional development and social management.

The Society for General Microbiology (SGM) is the largest learned microbiological society in Europe with a worldwide membership based in universities, industry, hospitals, research institutes and schools. The SGM publishes four journals presenting high-quality research findings.

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New weapon against C. Difficile: significant scientific breakthrough at Université de Saint-Boniface

The longevity of US presidents' mothers

3 August 2012 Last updated at 09:26 ET By Richard Knight BBC News

The mothers of US presidents and presidential candidates live far longer than the mothers of British prime ministers and opposition leaders. Is that just a statistical quirk?

Recreational statistics might not sound like your idea of fun but fiddling with numbers can yield fascinating discoveries.

Mike Shearing, a More or Less listener in Malaysia, thought he was on to something when he noticed that the mothers of post-war US presidents seem, on the whole, to have lived very long lives - much longer than the mums of British prime ministers.

He contacted More or Less to ask whether he had found something significant. The short answer is that he had. More or Less collated the age of death for every mother of a post-war US president or losing presidential candidate - except those who're still alive, of course - and for the mothers of every post-war British prime minister and losing opposition leader.

We analysed the data with the help of Dr George Leeson from Oxford University's Institute of Ageing.

"If we look at the US mothers we have an average age at death equal to 83.7 years," says Leeson, "and if we look at the UK mothers we have an average age at death of 74.8."

That's a big difference. Averages can be misleading, however, because a small number of outliers - or extreme measurements - can distort the picture. Rose Kennedy, for example, lived to 104. So Dr Leeson calculated the median figures, too.

"The median divides the data into two equal halves," he says, "so 50% of the observations are higher than the median, and 50% are lower. And the median is therefore less sensitive to outliers. The median for the US mothers is 84.5 - so very close to the average. For the UK mothers the average was almost 75, and the median is 76. So there's very little difference. It's not outliers."

Listen to More or Less on BBC Radio 4 and the World Service, or download the free podcast

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The longevity of US presidents' mothers

Applied DNA Sciences SigNature(R) DNA Sends UK Thieves to Jail for 53 Years

STONY BROOK, NY--(Marketwire -08/13/12)- Applied DNA Sciences, Inc. (APDN), (Twitter: @APDN), a provider of DNA-based anti-counterfeiting technology and product authentication solutions, announced today that its SigNature DNA product has once again helped to send criminals to prison. Forensic evidence, including SigNature DNA-marked stolen cash from Loomis cash boxes, was used to link the criminals to a crime spree spanning eight cash-in-transit (CIT) crimes in the United Kingdom. The sentences for the ten criminals total 53 years.

Detective Constable Will Roscoe, leader of Operation Tejat, an investigation launched by the Metropolitan Police Flying Squad based at the Barnes office, London, said: "This was a prolific gang of robbers specifically targeting cash in transit vans and custodians. I have no doubt they would have continued this course of action if it were not for a detailed and targeted operation to identify and arrest them. Their convictions and sentences represent a significant success for the Barnes Flying Squad and the MPS in our Total War on Crime."

Cash in transit (CIT) businesses transport and store cash and service ATMs. In the UK alone, an estimated 500 billion is transported each year, or 1.4 billion per day. The nature of this business makes CIT an attractive target for criminals, and as a result the industry invests millions each year in security equipment and devices. Attacks against CIT carriers in the UK has been reduced significantly over recent years due to the investments made in security and a close relationship between law enforcement agencies, customers and the industry. The impact of SigNature DNA has been notable in the CIT industry where APDN has been working with Loomis UK, a provider of specialist cash management services that use the most advanced security and technological solutions available.

As reported in the Guardian on July 27th, the now-convicted gang-of-10 stole more than 100,000 in eight robberies and attempted robberies of CIT vans in Mitcham, Streatham, Wallington and Croydon between January 3, 2011 and June 10, 2011. On all occasions, force was used against security guards to snatch cash boxes, which were later broken into and the cash contents stolen. Much of the cash was marked with SigNature DNA. Detectives carried out surveillance and forensic work, leading to the arrest of the ten robbers on or shortly after August 24, 2011. Nine of the ten pleaded guilty to robbery at Kingston Crown Court. One pleaded not guilty but was convicted of conspiracy to rob.

About Applied DNA Sciences

APDN is a provider of botanical-DNA based security and authentication solutions that can help protect products, brands and intellectual property of companies, governments and consumers from theft, counterfeiting, fraud and diversion. SigNature DNA and smartDNA, our principal anti-counterfeiting and product authentication solutions that essentially cannot be copied, provide a forensic chain of evidence and can be used to prosecute perpetrators.

The statements made by APDN may be forward-looking in nature. Forward-looking statements describe APDN's future plans, projections, strategies and expectations, and are based on assumptions and involve a number of risks and uncertainties, many of which are beyond the control of APDN. Actual results could differ materially from those projected due to our short operating history, limited financial resources, limited market acceptance, market competition and various other factors detailed from time to time in APDN's SEC reports and filings, including our Annual Report on Form 10-K, filed on December 8, 2011 and our subsequent quarterly reports on Form 10-Q. APDN undertakes no obligation to update publicly any forward-looking statements to reflect new information, events or circumstances after the date hereof to reflect the occurrence of unanticipated events.

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Applied DNA Sciences SigNature(R) DNA Sends UK Thieves to Jail for 53 Years

Posted in DNA

Herbage testing for herd nutrition assessment

Total nutrition including energy, protein, macro and micronutrients during calving and early lactation is critical to cow health while also determining milk production both this year and next.

Animal Nutrition Manager from farm nutrition company Altum, Jackie Aveling, says that an energy deficit in this period could impact cycling and conception rates, so it is important to provide a high quality balanced diet to meet nutrient needs.

"One of the best methods to determine if a herd is consuming adequate nutrients is herbage testing to pinpoint any limiting factors in the diet in combination with analysis from other supplementary feeds."

Dairy pasture data collected over the last five years from thousands of Altum clients has been statistically analysed to a 95% confidence interval by region, element and month to confirm seasonal trends:

Potassium levels are higher over winter and spring, then trend down over summer.

Magnesium and calcium - both key elements for the lactating cow - trend lower in winter and spring.

The majority of trace elements trend lower over the spring period as pasture growth increases, with a few exceptions.

"In a forage based diet, pasture potassium levels exceed the needs of calving and lactating cows.

"Potassium can negatively impact the availability of magnesium in the cow which increases the risk of milk fever. Identifying pasture potassium and magnesium levels will help farmers plan an effective supplementation programme," says Jackie.

"A robust supplementation programme includes a combination of methods including high quality magnesium directly provided to the herd through water, dry cow molasses lick blocks and pasture dusting."

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Herbage testing for herd nutrition assessment

Vitamin D and cancer – nine facts "they" won't tell you

by: Aurora Geib
Before, to be diagnosed with the big C seemed to be an implied death sentence. Patients even go through a stage of self-denial. Who can blame them? Conventional medicine paints a rather bleak future for cancer patients and the remedy it offers does nothing to improve their quality of life, nausea and falling hair not to mention.
However, the recent breakthroughs in science have allowed a peek into the true nature of cancer, allowing researchers to consider the concept of nutritional care. They are now faced with the idea that preventing and maybe even reversing cancer may not necessarily involve the development of expensive drugs but something already available in nature: food and sunshine! (http://dreddyclinic.com/forum/viewtopic.php?f=14&t=3)
Just the facts
If something so powerful is actually available for everyone, why wouldn't someone take advantage of it?
The recent discovery that the body, with the help of vitamin D, possesses the capacity to fight many chronic illnesses has spurred the interest of many researchers - especially on the possibilities the sunshine vitamin can offer with regard to the prevention and reversal of diseases like cancer. A brief rundown of some facts, revealed by recent studies, can give us a perspective on how vitamin D can help.Read more…

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Zoom tool stitches together thousands of nanoscopic cell images

By Liat Clark Courtesy of WIRED.CO.UK

07 August 12
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A team of molecular biologists has published a paper revealing how its "virtual nanoscopy" method creates detailed, high resolution images of cellular structures by "stitching" together thousands of electron microscope photos.

Electron microscopes can magnify an image by up to 10 million times using beams of electrons. However, the tool can only be used to either capture a single, detailed image of part of a cell or, at a lower resolution, a less-detailed overview of the cell. There was no way, until now, to relate the one to the other and give a contextual and detailed overview of the entire cell structure at once.

In the paper Virtual nanoscopy: Generation of ultra-large high resolution electron microscopy maps, Leiden University Medical Centre molecular biologist Frank Faas and his team explain how they have enabled "unbiased high resolution data access while maintaining the lower resolution overview of the cellular context". It's a little like Google Earth's zoom tool, but for cell biologists.

The team joined together 26,434 detailed photos of a 1.5 millimetre-long zebrafish embryo taken using an FEI Eagle CCD camera linked up to an electron microscope. The total data of all the photos that made up the full embryo picture amounted to 281 gigapixels, with a resolution of 16 million pixels per inch -- to visualise just what incredible detail that resolution offers, compare that pixel count to the 220 pixel-per-inch resolution boasted by Apple's new Retina display Macbook Pro. Seems pretty paltry now, doesn't it. The final image slide was created using a program specifically developed for the task -- MyStitch extracts metadata from transmission electron microscopy (TEM) images and uses this to pair the images, noting any overlaps and adjusting the joins appropriately. Images have been stitched together in a similar manner in the past, using tools such as Adobe Photoshop, but only on a much smaller scale. Generating a full image of a cellular structure calls for huge amounts of time-consuming data collection, so the team achieved its feat by automating some of the processes, from the data-stitching down to the photo-taking.

The final image has been published at the upgraded JCB DataViewer site where interested parties can play around with the zoom function and take in not only the embryo, but images of mouse glomeruli, human dendritic cells and mouse embryonic fibroblasts.

Medical professionals often zoom in on the part of a cell they believe to be the main area of focus, or the root of a problem. By presenting a comprehensive image, the new "virtual nanoscopy" method ensures they get the whole picture and do not miss or inadvertently skim over important elements.

"Virtual nanoscopy does not suffer from sparse or possibly biased selection of regions of interest for high resolution imaging," states the paper. "[It] provides an objective and representative approach to record, communicate, and share data of large areas of biological specimens at nanometre resolution."

And in a related story from newswise (Rockefeller University Press):

Virtual Nanoscopy: Like “Google Earth” for Cell Biologists

Just as users of Google Earth can zoom in from space to a view of their own backyard, researchers can now navigate biological tissues from a whole embryo down to its subcellular structures thanks to recent advances in electron microscopy and image processing, as described inThe Journal of Cell Biology (JCB). An upgrade to the JCB DataViewer (http://jcb-dataviewer.rupress.org), JCB’s browser-based image presentation tool, now also makes these data publicly accessible for exploration and discovery.

Since the early days of cell biology, electron microscopy has revealed cellular structures in exquisite detail. The technique has always been limited, however, by the fact that it can only capture a tiny portion of the cell in a single image at high resolution, making it difficult for researchers to relate the structures they see to the cell as a whole, let alone to the tissue or organ in which the cell is located. Viewing samples at lower resolution, on the other hand, can reveal the larger picture of a cell or tissue, but researchers then lose the benefit of seeing fine details.

A team of scientists from Leiden University Medical Center in the Netherlands has addressed this problem by developing new tools for stitching together thousands of electron microscopy images into single, high-resolution images of biological tissues—a “Google Earth” for cell biologists—which can be explored using the newly enhanced JCB DataViewer.

Faas et al. describe their recent advances to a technique called “virtual nanoscopy” in the August 6th issue of JCB. The researchers were able to stitch together over 26,000 individual images to generate an almost complete electron micrograph of a zebrafish embryo encompassing 281 gigapixels in total at a resolution of 16 million pixels per inch. Using the JCB DataViewer, anyone can navigate the zebrafish image from the level of the whole, 1.5 millimeter-long embryo down to subcellular structures.

The ability to integrate information across cells and tissues will provide researchers with exceptional opportunities for future discoveries. But the image’s large size and complexity meant that providing access to Faas et al.’s data necessitated a major upgrade to the JCB DataViewer, a browser-based image hosting platform originally launched in 2008 to promote the sharing of original data associated with JCB publications.

“If you can image it, you should be able to publish it,” says JCB Executive Editor Liz Williams. As a journal, “JCB remains committed to developing cutting-edge tools for the presentation of the data that drive progress in the field of cell biology.”
# # #
About The Journal of Cell Biology 
Founded in 1955, The Journal of Cell Biology (JCB) is published by The Rockefeller University Press. All editorial decisions on manuscripts submitted are made by active scientists in conjunction with our in-house scientific editors. JCB content is posted to PubMed Central, where it is available to the public for free six months after publication. Authors retain copyright of their published works and third parties may reuse the content for non-commercial purposes under a creative commons license. For more information, please visit http://www.jcb.org.

About the JCB DataViewer
The JCB DataViewer is an image hosting and presentation platform for original image data associated with articles published in JCB. Developed in a collaboration between Glencoe Software, Inc. (www.glencoesoftware.com) and the Rockefeller University Press (www.rupress.org), the JCB DataViewer was the first browser-based viewer for multidimensional microscopy image data. It is based on open source software built by the Open Microscopy Environment (OME; http://openmicroscopy.org).

Faas, F.G.A., et al. 2012. J. Cell Biol. doi:10.1083/jcb.201201140
Williams, E.H., et al. 2012. J. Cell Biol. doi:10.1083/jcb.201207117

 

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New SprintPic™ Macro Imaging System from SPOT Imaging Solutions

Sprint Pic

The new SPOT SprintPic turnkey macro imaging system makes it effortless to capture great images, increasing efficiency and saving photography time.   Including a scientific grade digital camera with a software-controlled motorized zoom lens on a lighted copy stand, the SprintPic system is preconfigured and ready to use so you can get up and running quickly.  Its large number of zoom levels accommodates a wide range of samples, from industrial parts to crime scene evidence to pathology grossing sections.  The SprintPic Software provides a monitor-sized live image preview with sliders for adjusting zoom level and iris aperture, so it’s easy to see when your sample is ready for capture.  Crosshair and grid reticles can be applied to the live preview to aid in counting or for visual inspection of part size.  When you snap a photo, it is immediately ready for adding annotations, measurements, or for saving to reports - no need to wait for images to download.   Images can be automatically transferred to laboratory information systems or saved to network file servers for archival.  Built-in high-output oblique and bottom lighting ensures true color reproduction and shadow removal.  The SprintPic macro imaging system takes the guesswork out of digital documentation.

SPOT Imaging Solutions

http://www.spotimaging.com/sprintpic

586-731-6000

 

 

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Submit your Visions Poster Presentation by August 31


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2012 PATHOLOGY VISIONS POSTER PRESENTATIONS
Deadline for Poster Abstract Submissions is August 31, 2012

Don’t miss the opportunity to submit an abstract for a poster presentation at the Digital Pathology Association’s (DPA) annual conference Pathology Visions, which will be held October 28-31, 2012 at the Hilton Baltimore in Baltimore, MD. Presented posters at Pathology Visions will be displayed for two days and discussed between presenters and meeting attendees. The posters will also be judged by appointed experts in the following categories:

- “Best Poster By a Resident”
- “Best Poster Submitted in the
   Research Category”
- “Best Poster Submitted in the
   Education Category”
- “Best Poster Submitted in the
   Clinical Category”
- “Peoples’ Choice Best Poster”

Awards will be handed out to the winner of
each category at Pathology Visions and a
cash prize will be given to the winner of the Resident category.

The deadline for poster abstract submissions is August 31, 2012. Click below to submit your poster abstract now.

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Automated, Reagent- and Scanner Independent CE-IVD Module for Her2-IHC Assessment in Breast Cancer – Validated on Data from More than 170 Pathology Labs

Visiopharm A/S, a global leader in Quantitative Digital Pathology, announced today release of its novel CE-IVD module HER2-CONNECT for assessing Her2 status in breast cancer patients

Without any requirements for manual outlining of tumor cells, the level of automation is very high.

Quote startIn summary, HER2-CONNECT™ showed 94% agreement with manual scoring and 95% diagnostic sensitivity and 99% diagnostic specificity.Quote end

Hoersholm, Denmark (PRWEB) August 07, 2012

As the first in a series of innovative CE-IVD diagnostic modules for cancer, Visiopharm is now releasing the HER2-CONNECT™ module in Europe for assessment of Her2 status in breast cancer patients.

In close collaboration with the NordiQC, the clinical performance of HER2-CONNECT has been determined by three studies comprising 796 tissue specimens prepared from breast carcinomas from 222 patients, using 6 expert reviewers/pathologists and representing 178 clinical pathology laboratories using DAKO, Roche-Ventana, Leica-Bond, and other HER2 IHC reagents. In summary, HER2-CONNECT™ showed 94% agreement with manual scoring and 95% diagnostic sensitivity and 99% diagnostic specificity.

Without any requirements for manual outlining of tumor cells, the level of automation is very high. Automation is achieved using a novel and patent pending principle of membrane connectivity for membranes detected in the tissue under examination [1,2 ].

Professor Mogens Vyberg, Director of the NordiQC, states: “Three requirements must be met in order for Digital Pathology to be useful in a routine diagnostic setting: It must be independent of reagent manufacturer and based on optimized and standardized staining procedures, exhibit high diagnostic performance in terms of sensitivity and specificity, and finally it must provide a high degree of automation. Our studies, of which some are still under preparation for publication, have demonstrated that the HER2-CONNECT™ module meet those requirements”.

"This is our first CE-IVD module in a series of modules coming out of our development pipeline. In our development, we are focusing on robustness, diagnostic quality, and last but not least automation. The critical step here is clinical validation and technical documentation. Visiopharm has invested significant resources in establishing the internal procedures and a quality system allowing us to develop, validate, and release CE-IVD modules for diagnostics in Europe", adds Johan Doré, CTO and co-founder of Visiopharm.

“We have now established the necessary platforms for rapid development of new image analysis algorithms and for providing comprehensive technical and clinical documentation. This will allow us to further accelerate an ambitious development program for new innovative techniques in diagnostics and companion diagnostics. We are doing that in collaboration with what we consider to be world-leaders in quality- and evidence based pathology”, says Michael Grunkin, CEO and co-founder of Visiopharm.

1. Brügmann, A., Eld, M., Lelkaitis, G., Nielsen, S., Grunkin, M., Hansen, J.D., Foged, N.T. & Vyberg, M., Digital image analysis of membrane connectivity is a robust measure of HER2 immunostains. Breast Cancer Res Treat. 2012; 132:41-9. 
2. Laurinaviciene, A., Dasevicius, D., Ostapenko, V., Jarmalaite, S., Lazutka, J. & Laurinavicius, A. Membrane connectivity estimated by digital image analysis of HER2 immunohistochemistry is concordant with visual scoring and fluorescence in situ hybridization results: algorithm evaluation on breast cancer tissue microarrays. Diagn Pathol, 2011, Vol. 6, pp. 87. 

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Mayo Clinic Settles Billing Lawsuit

According to the The Pathology Blawg this matter I first talked about in October 2010 has been settled by Mayo Clinic for $1.26 million.

Suit Alleges Mayo Overbilled for Pathology Services, Justice Department Joins Suit (Originally posted October 2010)

The below news item has been circulating for a couple of weeks following a suit originally filed about 3 years ago.  Several folks have asked me what I know about this.  

Did Mayo intentionally defraud the government of potentially millions of dollars for frozen sections not performed?

It is a difficult question to answer and I really do not know how strong the lawsuit claim is. 

I do not think Mayo intentionally would do this but it is a complicated issue.

The story actually begins about 100 years ago when Dr. Louis B. Wilson, credited with being the Father of Research at Mayo Clinic, developed the first techniques to rapidly fix tissue for sectioning during surgery at the request of Dr. William Mayo or what we recognize in pathology as the "frozen section". His techniques live on at Mayo today much like they did over 100 years ago.  The history of the procedure has recently been reviewed with reference to the original article by Dr. Wilson.

Enough history.  Fast forward about 100 years and according to Mayo's GME FAQ's on the frozen section practice it mentions: "The frozen section rotation is probably best thought of as neither a frozen section rotation nor a general surgical pathology rotation, and perhaps that is why residents have come to refer to it as the “sink” rotation. The volume and variety of specimen material seen by residents while on the sink is comparable to what would be seen during a general surgical pathology rotation at a large medical center, yet the workflow is that of a frozen section laboratory. " The site goes on to mention " In the Mayo frozen section labs, a single-color toluidine stain is used because it produces a fast and easily readable stain. The toluidine blue stain produces a slightly different staining pattern compared to H&E, but the morphologic features are inherent to the tissue."

I never understood "morphologic features are inherent to the tissue".  Histology is artifact.  We create it with dyes - a chemical process creates purple nuclei and pink cytoplasm.  In the case of toluidine blue stain, as above, it is largely monochromatic with less contrast than traditional H&E stains, whether frozen or fixed.  

Until recently, with increasing pressure from CAP inspectors, slides reviewed at frozen may not have had a corresponding H&E permanent slide to review for frozen-final correlation.  The tissue used in the frozen section was "blocked" without making an H&E slide.  Again, the practice is unique and would be difficult to validate in many other labs if one takes an objective view.

It also turns out that given the water based nature of the stain and the stain itself it was difficult to make a "permanent" slide for later review as the stain may continue to permeate the tissue.

Given the unique practice, essentially a general surgical pathology practice with final diagnosis made on frozens at the time of surgery rather than "permanent" sections,  issues related to frozen section slides, blocks and permanent slides could all potentially complicate billing algorithms as the suit alleges.  

While the parties bringing forth the suit and the Justice Department are looking at the letter of the law, a persistent question will remain whether whatever may have happened here in regards to billing was justifiable (i.e. cost effective) given potential lack of need for second surgeries, immediate intraoperative staging and overall costs to the system for additional laboratory technical and professional resources to generate additional slides, reviews and reports as compared to outcomes in a "frozen section = final diagnosis" practice alone.  This practice is highlighted on Mayo's breast cancer website:

"Mayo Clinic physicians may use frozen section evaluation of tissue during breast cancer surgery to determine whether all of the cancer has been removed. Mayo Clinic's unique frozen section pathology laboratory provides rapid, accurate microscopic analysis of tissue while the patient is in surgery. Mayo surgeons know if they have achieved negative margins (removed all the cancer) while the patient is still in the operating room. Frozen section analysis may prevent the need for patients to undergo additional surgery."

It should be noted from a similar story out of Minneapolis -- "The Justice Departmentindicated in a September 21 court filing that it intends to intervene in the allegation that the Mayo Clinic billed for services that were not performed. The department will not become involved, however, in the claims that the Mayo Clinic improperly obtained laboratory accreditation and failed to retain histopathology slides for the appropriate time period.

Courtesy of genomeweb.com:

The Justice Department has joined a lawsuit against the Mayo Clinic alleging it submitted fraudulent claims to Medicare and Medicaid for thousands of surgical pathology tests over 10 years that its labs never performed.

The government's position, filed this week under the federal False Claims Act in a US District Court in Minneapolis, said that "over the course of the last 10 years, Mayo has routinely billed Medicare, Medicaid and other federally sponsored health care programs for surgical pathology services that have not been performed," according to the Pittsburgh Tribune-Review.

The suit, which was originally filed in November 2007 by attorney and neurologist David Ketroser, accuses Mayo of billing Medicare for permanent specimen slides and for examining the slides, "even though no slides were prepared or examined," the paper says. "Instead, the suit charges, Mayo routinely prepared only frozen section slides, which were not retained."

The suit also claims Mayo failed to comply with federal regulations that require clinical lab to retain pathology slides for 10 years.

The plaintiffs in the suit include former Mayo patients, survivors of deceased Mayo patients, and Minnesota attorney David Ketroser.

Mayo officials did not respond to a request for comment, according to the Tribune-Review.

A few days after its original report, the paper wrote that Mayo officials said the Clinic reimbursed the government for what the paper called "billing errors" on the pathology tests.

Mayo spokesman Bryan Anderson said Minnesota-based Mayo discovered the errors three years ago — "long before Mayo became aware that the sealed complaint [against it] had been filed" — and "voluntarily" refunded $242,711, the paper said.

The total amount of Mayo's alleged fraudulent billing was not immediately clear.

 

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23andMe Submits Genetic Test Applications with the FDA

Courtesy of DarkDaily:


45380_web
23andMe executives want the credibility that FDA clearance provides for its DNA tests and declared their intent to eventually support more clinical laboratory test applications

Offering genetic tests directly to consumers is a controversial subject among some pathologists and healthcare ethics experts, who question both the science of these tests and whether consumers will do the right thing with the information.

Read more from the source.

 45380_web

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Natural-language processing tool flags breast, prostate cancer

August 3, 2012 | By Susan D. Hall FierceHealthIT

Researchers claimed success using an SAS-based natural-language processing (NLP) tool to detect breast and prostate cancers from pathology reports, according to a study published this week in the Journal of the American Medical Informatics Association.

Results from the SAS-based coding, extraction, and nomenclature tool (SCENT) were compared with a random sample of 400 breast and 400 prostate cancer patients diagnosed at Kaiser Permanente Southern California whose results were classified manually.

SCENT successfully identified 51 of 54 primary and 60 of 61 recurrent cancers. It flagged only three false positives from 793 known benign results. Measures of sensitivity, specificity, positive predictive value, and negative predictive value exceeded 94 percent in both cancer groups.

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The authors noted that previous research has found natural language processing tools useful in coding and extracting information from clinical text. Indeed a recent paper published in Radiology cited success with a tool to parse data from records to build a repository of data to improve dosing recommendations.

They attributed the slow rate of adoption, however, to difficulty in integration with clinical data systems, technical complexity, and habitual use of medical claims data.

Creating a common dictionary of terms can be painstaking work as illustrated in a study on the use of NLP in breast cancer research published recently in theJournal of Pathology Informatics. It reported 124 ways of saying "invasive ductal carcinoma" and 95 ways of saying "invasive lobular carcinoma" and more than 4,000 ways of saying invasive ductal carcinoma was not present.

The authors noted the system probably would require tweaking to work with clinical text in other medical areas and outside of Kaiser Permanente, but the system "has the potential to provide significant value to clinical and epidemiologic researchers, particularly when statistical NLP is infeasible due to resource or other constraints."

A second article on natural language processing in JAMIA found the technology effective for de-identifying clinical health data for research, promising relief from the tedium of manually coding records from which personal information had been scrubbed.

While much data for research remains outside machine-readable formats, platforms enabling comparative-effectiveness research too often lack natural- language processing capabilities, according to a Medical Care study.

To learn more:
- read the research
- check out the Journal of Pathology Informatics study

Related Articles:
Studies show data mining's promise for radiology dose monitoring
Natural-language processing effective for de-identifying clinical health data
Platforms for comparative effectiveness research still evolving

Read more: Natural-language processing tool flags breast, prostate cancer - FierceHealthIT http://www.fiercehealthit.com/story/natural-language-processing-tool-flags-breast-prostate-cancer/2012-08-03#ixzz22jOsB2kk 

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Quay Brothers Retrospective in New York City! "On Deciphering the Pharmacist's Prescription for Lip-Reading Puppets," Museum of Modern Art, NYC

I just had the honor to view the beautifully installed and revelatory Quay Brothers retrospective "On Deciphering the Pharmacist's Prescription for Lip-Reading Puppets" at the Museum of Modern Art in New York. I have long been a fan of the Quay's work, and still, this exhibition had much to astonish, delight and surprise, situating the Quay's work within the larger context of an avant-garde tradition, and revealing the Quay's oeuvre to be much broader and richer than expected. Surprises and highlights included pen and ink drawings evoking a slightly less whimsical Edward Gorey, a mini-exhibition of the of the kind of Polish theater posters from the 1960s which inspired much of their work, and paintings by a scientific illustrator who mentored them in high school. Also of special interest, at least to me, was a collection of 8 mm Eastern European travel films which The Quay's collected as inspiration for their work; these grainy and blurred snatches of dark and forgotten streets, shop windows with wax mannequin heads, and church interior possess much of the atmosphere, mystery, and powerful detail evident the Quay's best works; they serve as both an excellent introduction to the exhibition and an illuminating key to their film work.

If you are able to visit the exhibition--which I very highly recommend!--make very sure not to miss the bottom floor portion of the exhibit, where you will find a collection of The Quay Brother's dioramic film decors installed in what feels like a furtive peepshow, a sort of perverse and surrealistic Musée Mécanique. Here you can immerse yourself in the tiny and exquisite sets from such films as Street of Crocodiles; Le Bourgeois Gentilhomme; The Piano Tuner of Earthquakes; and The Cabinet of Jan Svankmajer; their wealth of detail rewards a careful and slow eye. Also, make sure to set some time aside to watch the films, many of which play in mini-theatres set up within the exhibition; the ballet piece The Sandman was an especial revelation to this viewer; dance and the Quays go surprisingly well together.

As we see in this exhibition, the through line of The Quay's long and storied careers--which has spanned drawing, painting, film, animation, theater and graphic design, and dioramic "film decors"-- is a sense of mysterious and compelling atmosphere created by an exacting and exquisite attention to detail: the craquelure of antique objects, a perfectly fractured piece of glass, the patina of caked on dirt, the hand-rendered imperfection of calligraphic script, the artful use of shadow, and, above all, a wonderful wit and humor that counterbalances the unapologetic inscrutability of the work. Do not miss this exhibition! You will never look at the work of the Quay Brothers the same way again. In a good way!

The exhibition will be on view at New York Museum of Modern Art from August 12–January 7.You can find out about the exhibition here. Also, the museum will be hosting a series of screenings of Quay Brothers films running the duration of the exhibition; you can find out more about that here.

All above images were taken in the exhibition.

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On The Curious Victorian Phenomenon of Exactingly Produced Miniature Butcher Shops, Collector's Weekly, 2012

PETA would never approve: This grisly 1840 doll-sized butcher shop with miniature animal carcasses and a floor covered in sawdust and blood would be shockingly graphic to our modern sensibilities. After all, here in the 21st century, we like to remain cheerfully oblivious about where our meat products come from.

But in Victorian times, such detailed model butcher shops were not uncommon, says Sarah Louise Wood, a curator at the Museum of Childhood at the Victoria and Albert Museum in London. The real question is: Why exactly do such things exist?
--Baby’s First Butcher Shop, Circa 1900, Collector's Weekly, Lisa Hix

Find out more by about this forgotten art by reading the entirety of "Baby’s First Butcher Shop, Circa 1900"  on the Collector's Weekly website by clicking here.

All images drawn from the Collector's Weekly website. You can see larger copies by clicking on images, and find out more by clicking here.

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"Objectify This: Female Anatomy Dissected and Displayed," Exhibition Curated by Street Anatomy's Vanessa Ruiz, September 7-29, Chicago

Just received notice of the very exciting looking exhibition "Objectify This: Female Anatomy Dissected" curated by Vanessa Ruiz, founder of the wonderful Street Anatomy Blog; images from the show above, and full info follows:

'OBJECTIFY THIS: Female Anatomy Dissected and Displayed', a group exhibition of paintings and illustrations featuring the underlying anatomy of the female body.

September 7th – September 29th
Design Cloud Gallery
118 N. Peoria St. 2N, Chicago, IL

Opening event Friday, September 7th, 6–10p.m. with burlesque performances by Chicago's Vaudezilla troupe.

Throughout time, female anatomical illustration has evoked a multitude of feelings beyond simple academic representation. It's one of the reasons why the male form has been the exemplum of the human body throughout time, with the female being illustrated only as the variation in terms of reproductive organs and surface anatomy. This gallery show seeks to portray females only in relation to other females. It will compel viewers to question the objectivity surrounding ‘female anatomy’ and define—or re-define—their own perceptions through the art, perspectives, literature, and live burlesque performances.

Featured artists: Fernando Vicente, Jason Levesque, Cake, Michael Reedy, Emily Evans, Danny Quirk, Pole Ka, Tristan des Limbes, Amylin Loglisci.

You can find out more by clicking here.

Images, Top to bottom (click on images to see larger version):

  1. "American Housewife" by Fernando Vicente
  2. "Anatomical Meluxine" by Jason Levesque, 2012
  3. "Christina" by Danny Quirk, 2010

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Good nutrition should start at home, but new school lunch rules probably a good thing

I read this week that new nutrition rules go into effect this fall for school cafeterias. For the most part, this is probably a good thing, given the fact that a lot of kids these days are carrying way too much weight for their age.

However, it is my humble opinion that proper nutrition for children should probably start at home long before they enroll in school. Given what I saw at the ballpark this summer, it's no surprise that some children have developed a bit of a weight problem by the time they hit first grade.

I watched in amazement a few weeks ago as a "portly" mother pushed her "husky" child in a stroller into the ballpark. The first thing Mom did was pop open a Mountain Dew and poured it into her son's sippy cup. The next thing to come out of the diaper bag was a bag of Oreos. Mom went to the concession stand and bought a big mess of chips and cheese and what looked to me like a foot-long Snicker bar. Of course, they shared.

Inning three It was back to the concession stand for another foot-long candy bar and a bag of popcorn with triple-extra butter and a 24 ounce bottle of fully-leaded Mountain Dew. Is it any wonder this child might develop a weight problem by the time he hits the public school system?

When I attended grade school in Carmi, Ill., we had a wonderful cook. Jo Colson and her staff paid close attention to the kids that came through the cafeteria line. She knew exactly who needed better nutrition and more calories, and who needed to watch their waistline.

I don't remember having free or reduced price meals back then. If you didn't have lunch money, you were given an opportunity to work in the cafeteria to get your meals free. If I had a nickel for every meal tray I scraped and every table I helped clear when I was in grade school, I'd probably be a millionaire today. But I had plenty to eat.

Unlike today, I was quite skinny back then. Some people said I was so skinny, I didn't cast a shadow. Mrs. Colson saw to it that I had plenty to eat, and never went home from school hungry.

It's certainly not my place to tell the Mountain Dew and Oreo packin' mama that she's turning her son into a porker. She will have to figure that out for herself.

But, here's why I think the new school cafeteria nutrition rules that go into effect this year are a good thing. It is a fact that for many children, the meals they get at school will be the best and most nutritional food they'll get all day long. If they get good food in school, and we can teach them good eating habits at a very young age, perhaps their children will be even healthier.

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Good nutrition should start at home, but new school lunch rules probably a good thing

How to Read Nutrition Labels

Many people turn to counting calories when they want to lose weight. But how many of us really know what theyre reading when they scroll through a nutrition label? Here are a few things you should know before tossing any item into your grocery cart.

Serving size is the first line of the nutrition label and the single most important thing to understand. A product that is being marketed as a low calorie snack is only talking about one serving. So if you are eating the whole box, rest assured you are getting more calories than you bargained for.

Frequently, when buying a bag of chips or a drink many consumers think, this looks like one serving. But cute, individually wrapped items can be deceiving. Many snack-sized items often have 2.5 servings. That means that you can take the calories per serving, lets say they are 150, and multiply them by the amount of servings. Eat that cute, individual bag of personal chips and voila, those personal chips just gave your body 375 calories. Doesnt sound like such a healthy snack anymore, does it? Before you pick up an item that you plan on devouring solo, make sure that its just meant just for one.

The same advice applies when considering what bread to buy in the grocery store. When you look at the nutrition label, youll see that most brands consider just one slice of bread to be one serving. But its not easy to make a sandwich with just one slice! Look for bread that offers two slices for less than 150 calories with a good helping of fiber (more on that later).

Fat Matters

Immediately under calories on the nutrition label youll find that foods sometimes offer calories from fat. Generally, you should try to keep fat in your food at an absolute minimum unless the product contains healthy fats from nuts, grains, seeds or avocado. And before you even go there, let me I assure you, Oreos and Doritos do not.

Most people know by now that not all fats are created equal. Companies in the US are now required to list trans fat since they have been directly linked to clogged arteries (which can lead to heart attacks and strokes). In general, make sure you see a big fat zero next to the words trans fat on the nutrition label. Polyunsaturated fats are the healthy fats, while saturated fats should be consumed in limited quantities. The combination of saturated fat and cholesterol is actually what leads to higher levels of cholesterol in the blood. So its not just cholesterol (which is the next item on the label) that you should be looking at.

Watch Out for Sodium

Sodium is another hot ticket item since it is essential for proper cell function, but overwhelmingly, Americans are consuming way too much of this mineral since it is over-used as a preservative for packaged products. This is where knowing how much is okay is important. The RDA suggests that healthy individuals under the age of 51 limit sodium intake to 2,300 mg per day. Check out the label of your favorite frozen meal, most have close to 1,000 mg, while some even surpass 2,000 mg -- and thats just for one meal.

Carbs Are NOT the Enemy

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Scientists integrating multiple organ-on-chip systems to mimic the whole human body

Wyss Institute researchers and a multidisciplinary team of collaborators seek to build and link 10 human organs-on-chips to mimic whole body physiology. The system will incorporate the Institute's Human Lung-on-a-Chip (top) and Human Gut-on-a-Chip (bottom).

The Wyss Institute for Biologically Inspired Engineering at Harvard University today announced that it has entered into a Cooperative Agreement worth up to $37 million with the Defense Advanced Research Projects Agency (DARPA) to develop an automated instrument that integrates 10 human organs-on-chips to study complex human physiology outside the body. This effort builds on the Institute's past breakthroughs in which Institute researchers engineered microchips that recapitulate the microarchitecture and functions of living organs, such as the lung, heart, and intestine. Each individual organ-on-chip is composed of a clear flexible polymer -- about the size of a computer memory stick -- that contains hollow microfluidic channels lined by living human cells. Because the microdevices are translucent, they provide a window into the inner-workings of human organs without having to invade a living body.

With this new DARPA funding, Institute researchers and a multidisciplinary team of collaborators seek to build 10 different human organs-on-chips, to link them together to more closely mimic whole body physiology, and to engineer an automated instrument that will control fluid flow and cell viability while permitting real-time analysis of complex biochemical functions. As an accurate alternative to traditional animal testing models that often fail to predict human responses, this instrumented "human-on-a-chip" will be used to rapidly assess responses to new drug candidates, providing critical information on their safety and efficacy.

Several U.S. agencies are working together to help safeguard Americans from deliberate chemical, biological, radiological, and nuclear threats, as well as from emerging infectious diseases, by drastically accelerating the drug development process. As an example, DARPA, the National Institutes of Health (NIH), and the U.S. Food and Drug Administration (FDA) are actively collaborating to develop cutting edge technologies to predict drug safety. The Wyss project was selected under the DARPA Defense Sciences Office (DSO) Microphysiological Systems Program and will be administered through a Cooperative Agreement by the Army Research Office (ARO) and DARPA.

This unique platform could help ensure that safe and effective therapeutics are identified sooner, and ineffective or toxic ones are rejected early in the development process. As a result, the quality and quantity of new drugs moving successfully through the pipeline and into the clinic may be increased, regulatory decision-making could be better informed, and patient outcomes could be improved.

Jesse Goodman, FDA Chief Scientist and Deputy Commissioner for Science and Public Health, commented that the automated human-on-chip instrument being developed "has the potential to be a better model for determining human adverse responses. FDA looks forward to working with the Wyss Institute in its development of this model that may ultimately be used in therapeutic development."

Provided by Harvard University

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Scientists integrating multiple organ-on-chip systems to mimic the whole human body