Funk, V.A., Anderberg, A.A., Baldwin, B.G., Bayer, R.J., Bonifacino, J.M., Breitwieser, I., Brouillet, L., Carbajal, R., Chan, R. & Coutinho, A.X. Compositae Metatrees: The Next Generation, Systematics, Evolution, and Biogeography of Compositae (2009).
Pascual-Daz, J. P., Garcia, S. & Vitales, D. Plastome diversity and phylogenomic relationships in Asteraceae. Plants 10(12), 2699 (2021).
Article PubMed PubMed Central Google Scholar
Adkins, S. & Shabbir, A. Biology, ecology and management of the invasive parthenium weed (Parthenium hysterophorus L.). Pest Manag. Sci. 70(7), 10231029 (2014).
Article CAS PubMed Google Scholar
Navie, S., Panetta, F., McFadyen, R. & Adkins, S. Behaviour of buried and surface-sown seeds of Parthenium hysterophorus. Weed Res. (Oxford) 38(5), 335341 (1998).
Article Google Scholar
Tamado, T., Ohlander, L. & Milberg, P. Interference by the weed Parthenium hysterophorus L. with grain sorghum: Influence of weed density and duration of competition. Int. J. Pest Manag. 48(3), 183188 (2002).
Article Google Scholar
Bajwa, A. A., Chauhan, B. S. & Adkins, S. W. Germination ecology of two Australian biotypes of ragweed parthenium (Parthenium hysterophorus) relates to their invasiveness. Weed Sci. 66(1), 6270 (2018).
Article Google Scholar
Kaur, M., Aggarwal, N.K., Kumar, V. & Dhiman, R. Effects and management of Parthenium hysterophorus: A weed of global significance. In International Scholarly Research Notices 2014 (2014).
Singh, S., Khanna, S., Moholkar, V. S. & Goyal, A. Screening and optimization of pretreatments for Parthenium hysterophorus as feedstock for alcoholic biofuels. Appl. Energy 129, 195206 (2014).
Article ADS CAS Google Scholar
Reddy, K. N., Bryson, C. T. & Burke, I. C. Ragweed parthenium (Parthenium hysterophorus) control with preemergence and postemergence herbicides. Weed Technol. 21(4), 982986 (2007).
Article CAS Google Scholar
Javaid, A. & Adrees, H. Parthenium management by cultural filtrates of phytopathogenic fungi. Nat. Prod. Res. 23(16), 15411551 (2009).
Article CAS PubMed Google Scholar
Khan, H., Marwat, K. B., Hassan, G. & Khan, M. A. Socio-economic impacts of parthenium (Parthenium hysterophorus L.) in Peshawar valley, Pakistan. Pak. J. Weed Sci. Res. 19(3), 2013 (2013).
Google Scholar
Shabbir, A., Dhileepan, K., ODonnell, C. & Adkins, S. W. Complementing biological control with plant suppression: Implications for improved management of parthenium weed (Parthenium hysterophorus L.). Biol. Control 64(3), 270275 (2013).
Article Google Scholar
Gaudeul, M., Giraud, T., Kiss, L. & Shykoff, J. A. Nuclear and chloroplast microsatellites show multiple introductions in the worldwide invasion history of common ragweed, Ambrosia artemisiifolia. PloS one 6(3), e17658 (2011).
Article ADS CAS PubMed PubMed Central Google Scholar
Ueno, S., Rodrigues, J. F., Alves-Pereira, A., Pansarin, E. R. & Veasey, E. A. Genetic variability within and among populations of an invasive, exotic orchid. AoB Plants 7, plv077 (2015).
Article PubMed PubMed Central Google Scholar
Dar, T. H., Raina, S. N. & Goel, S. Cytogenetic and molecular evidences revealing genomic changes after autopolyploidization: A case study of synthetic autotetraploid Phlox drummondii hook. Physiol. Mol. Biol. Plants 23, 641650 (2017).
Article CAS PubMed PubMed Central Google Scholar
Te Beest, M. et al. The more the better? The role of polyploidy in facilitating plant invasions. Ann. Bot. 109(1), 1945 (2012).
Article Google Scholar
Gray, M. W. The evolutionary origins of organelles. Trends Genet. 5, 294299 (1989).
Article CAS PubMed Google Scholar
Howe, C. J. et al. Evolution of the chloroplast genome. Philos. Trans. R. Soc. Lond. Ser. B Biol. Sci. 358(1429), 99107 (2003).
Article CAS Google Scholar
Henry, R. J. Plant Diversity and Evolution: Genotypic and Phenotypic Variation in Higher Plants (Cabi Publishing, 2005).
Book Google Scholar
Loeuille, B. et al. Extremely low nucleotide diversity among thirty-six new chloroplast genome sequences from Aldama (Heliantheae, Asteraceae) and comparative chloroplast genomics analyses with closely related genera. PeerJ 9, e10886 (2021).
Article PubMed PubMed Central Google Scholar
Timme, R. E., Kuehl, J. V., Boore, J. L. & Jansen, R. K. A comparative analysis of the Lactuca and Helianthus (Asteraceae) plastid genomes: identification of divergent regions and categorization of shared repeats. Am. J. Bot. 94(3), 302312 (2007).
Article CAS PubMed Google Scholar
Mardanov, A. V. et al. Complete sequence of the duckweed (Lemna minor) chloroplast genome: Structural organization and phylogenetic relationships to other angiosperms. J. Mol. Evolut. 66, 555564 (2008).
Article ADS CAS Google Scholar
Kumar, S., Hahn, F. M., McMahan, C. M., Cornish, K. & Whalen, M. C. Comparative analysis of the complete sequence of the plastid genome of Parthenium argentatum and identification of DNA barcodes to differentiate Parthenium species and lines. BMC Plant Biol. 9(1), 112 (2009).
Article Google Scholar
Hollingsworth, P. M., Graham, S. W. & Little, D. P. Choosing and using a plant DNA barcode. PloS one 6(5), e19254 (2011).
Article ADS CAS PubMed PubMed Central Google Scholar
Yin, P., Kang, J., He, F., Qu, L.-J. & Gu, H. The origin of populations of Arabidopsis thalianain China, based on the chloroplast DNA sequences. BMC Plant Biol. 10(1), 116 (2010).
Article Google Scholar
Bock, R. & Khan, M. S. Taming plastids for a green future. Trends Biotechnol. 22(6), 311318 (2004).
Article CAS PubMed Google Scholar
Dierckxsens, N., Mardulyn, P. & Smits, G. NOVOPlasty: De novo assembly of organelle genomes from whole genome data. Nucleic Acids Res. 45(4), e18e18 (2017).
PubMed Google Scholar
Luo, R. et al. SOAPdenovo2: An empirically improved memory-efficient short-read de novo assembler. Gigascience 1(1), 2047-217X-118 (2012).
Article Google Scholar
Sugiura, M., Shinozaki, K., Zaita, N., Kusuda, M. & Kumano, M. Clone bank of the tobacco (Nicotiana tabacum) chloroplast genome as a set of overlapping restriction endonuclease fragments: Mapping of eleven ribosomal protein genes. Plant Sci. 44(3), 211217 (1986).
Article CAS Google Scholar
Yang, T. et al. Comparative analyses of 3,654 plastid genomes unravel insights into evolutionary dynamics and phylogenetic discordance of green plants. Front. Plant Sci. 13, 808156 (2022).
Article PubMed PubMed Central Google Scholar
Dempewolf, H. et al. Establishing genomic tools and resources for Guizotia abyssinica (Lf) Cass.The development of a library of expressed sequence tags, microsatellite loci, and the sequencing of its chloroplast genome. Mol. Ecol. Resour. 10(6), 10481058 (2010).
Article CAS PubMed Google Scholar
Ma, J. Analysis of genome characteristics of Helianthus annuus J-01 chloroplast. In IOP Conference Series: Earth and Environmental Science. 012046 (IOP Publishing, 2021).
Azarin, K., Usatov, A., Makarenko, M., Khachumov, V. & Gavrilova, V. Comparative analysis of chloroplast genomes of seven perennial Helianthus species. Gene 774, 145418 (2021).
Article CAS PubMed Google Scholar
Curci, P. L., De Paola, D., Danzi, D., Vendramin, G. G. & Sonnante, G. Complete chloroplast genome of the multifunctional crop globe artichoke and comparison with other Asteraceae. PloS one 10(3), e0120589 (2015).
Article PubMed PubMed Central Google Scholar
Asaf, S. et al. Chloroplast genomes of Arabidopsis halleri ssp. gemmifera and Arabidopsis lyrata ssp. petraea: Structures and comparative analysis. Sci. Rep. 7(1), 7556 (2017).
Article ADS PubMed PubMed Central Google Scholar
Xu, J. et al. The first intron of rice EPSP synthase enhances expression of foreign gene. Sci. China Ser. C Life Sci. 46, 561569 (2003).
Article CAS Google Scholar
Wolf, P. G. et al. The evolution of chloroplast genes and genomes in ferns. Plant Mol. Biol. 76, 251261 (2011).
Article CAS PubMed Google Scholar
Oliver, M. J. et al. Chloroplast genome sequence of the moss Tortula ruralis: Gene content, polymorphism, and structural arrangement relative to other green plant chloroplast genomes. BMC Genomics 11, 18 (2010).
Article Google Scholar
Wicke, S., Schneeweiss, G. M., Depamphilis, C. W., Mller, K. F. & Quandt, D. The evolution of the plastid chromosome in land plants: Gene content, gene order, gene function. Plant Mol. Biol. 76, 273297 (2011).
Article CAS PubMed PubMed Central Google Scholar
Jansen, R. K. et al. Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns. Proc. Natl. Acad. Sci. 104(49), 1936919374 (2007).
Article ADS CAS PubMed PubMed Central Google Scholar
Nakkaew, A., Chotigeat, W., Eksomtramage, T. & Phongdara, A. Cloning and expression of a plastid-encoded subunit, beta-carboxyltransferase gene (accD) and a nuclear-encoded subunit, biotin carboxylase of acetyl-CoA carboxylase from oil palm (Elaeis guineensis Jacq.). Plant Sci. 175(4), 497504 (2008).
Article CAS Google Scholar
Nie, X. et al. Comparative analysis of codon usage patterns in chloroplast genomes of the Asteraceae family. Plant Mol. Biol. Rep. 32, 828840 (2014).
Article CAS Google Scholar
Cavalier-Smith, T. Chloroplast evolution: Secondary symbiogenesis and multiple losses. Curr. Biol. 12(2), R62R64 (2002).
Article CAS PubMed Google Scholar
Nie, X. et al. Complete chloroplast genome sequence of a major invasive species, crofton weed (Ageratina adenophora). PloS one 7(5), e36869 (2012).
Article ADS CAS PubMed PubMed Central Google Scholar
Asaf, S. et al. The complete chloroplast genome of wild rice (Oryza minuta) and its comparison to related species. Front. Plant Sci. 8, 304 (2017).
Article PubMed PubMed Central Google Scholar
Saski, C. et al. Complete chloroplast genome sequences of Hordeum vulgare, Sorghum bicolor and Agrostis stolonifera, and comparative analyses with other grass genomes. Theor. Appl. Genet. 115, 571590 (2007).
Article CAS PubMed PubMed Central Google Scholar
Tangphatsornruang, S. et al. The chloroplast genome sequence of mungbean (Vigna radiata) determined by high-throughput pyrosequencing: Structural organization and phylogenetic relationships. DNA Res. 17(1), 1122 (2010).
Article CAS PubMed Google Scholar
Gao, L., Yi, X., Yang, Y.-X., Su, Y.-J. & Wang, T. Complete chloroplast genome sequence of a tree fern Alsophila spinulosa: Insights into evolutionary changes in fern chloroplast genomes. BMC Evolut. Biol. 9(1), 114 (2009).
Article Google Scholar
Zhao, Y. et al. The complete chloroplast genome provides insight into the evolution and polymorphism of Panax ginseng. Front. Plant Sci. 5, 696 (2015).
Article PubMed PubMed Central Google Scholar
Rose, O. & Falush, D. A threshold size for microsatellite expansion. Mol. Biol. Evolut. 15(5), 613615 (1998).
Article CAS Google Scholar
Huotari, T. & Korpelainen, H. Complete chloroplast genome sequence of Elodea canadensis and comparative analyses with other monocot plastid genomes. Gene 508(1), 96105 (2012).
Article CAS PubMed Google Scholar
Qian, J. et al. The complete chloroplast genome sequence of the medicinal plant Salvia miltiorrhiza. PloS one 8(2), e57607 (2013).
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