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Daily Archives: March 7, 2013
Private SpaceX Capsule Brings Big Science to Space Station
Posted: March 7, 2013 at 4:02 pm
The International Space Station is now home to more than 1,200 pounds (544 kilograms) of supplies delivered by an unmanned, privately built space capsule that reached the orbiting science laboratory on Sunday (March 3).
Among the goods SpaceX's Dragon capsule transported to the station were science experiments primed and ready for the six international residents of the space station.
"Dragon is scheduled to return to Earth on March 25, bringing home nearly double the amount of supplies it brought up, about 2,668 pounds (1,210 kilograms)," NASA officials said in a statement. "Returning investigation samples will demonstrate how life in microgravity affects the growth of plant seedlings, changes to the human body, the behavior of semiconductors and detergents, and more."
Some of the experiments will only stay on board for three weeks, making a round trip back to Earth with Dragon when the capsule detaches from the station. One of those experiments involves thale cress, a plant used in many experiments because of its small, relatively easy-to-map genome.
Scientists affiliated with NASA and the European Space Agency sent up one experiment called "Seedling Growth-1," designed to investigate how well plants grow amid stresses such as low oxygen. [See video of SpaceX's Dragon docking in orbit]
"The experiment will study how plants adapt to micro- and low-gravity environments," NASA officials wrote in a statement. "Researchers hope to determine the ability of vegetation to provide a complete, sustainable, dependable and economical means for human life-support in space."
Beyond helping scientists learn how to grow food in space, the research might contribute to better agricultural practices back on Earth. Understanding how these plants react to a stressful environment could lend insight into how farmers could mitigate those taxing situations back on the planet's surface.
Some of the experiments sent to theInternational Space Station will play a role in education, as well.
"Students from several California schools developed investigations to study bacteria, iron corrosion, battery performance and carbon dioxide levels aboard the station, all of which will be delivered by Dragon," NASA officials wrote in a statement.
Personal product manufacturer Procter & Gamble sent up another experiment that will study how to better preserve toothpaste, gels and creams.
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US-Russian Crew Launching to Space Station in Record Time
Posted: at 4:02 pm
The next crew to launch toward the International Space Station will make the trip faster than any astronauts before them, thanks to a new docking plan being tested this month.
NASA astronaut Chris Cassidy and Russian cosmonauts Pavel Vinogradov and Alexander Misurkin are set to launch to the space station March 28 at4:43 p.m. EDT (2043 GMT) aboard a Russian Soyuz capsule. While it normally takes Soyuz vehicles two days to reach the orbiting laboratory after launch, Cassidy, Vinogradov and Misurkin will make the trip in just six hours.
"I think it's much more interesting when you fly faster," Vinogradov said during a press conference at the crew's Star City, Russia training site. "It's just like in a train," he added, saying he preferred to make quick train trips rather than spend many hours traveling.
Vinogradov and his crew are performing their final mission training for the Soyuz launch from the Central Asian spaceport of Baikonur Cosmodrome in Kazakhstan, where the local time will be March 29 at liftoff. The six-hour journey will include just four orbits of Earth, officials said.
The new travel scheme has been previously successfully tested with unmanned Russian Progress cargo ships, but never before with manned spacecraft. Officials say the time has come to speed up travel to the space station because spacecraft have become more automated, so the strain on ground-based Mission Control teams isn't so great.
"Now we have onboard a new machinery and new software so the vehicle is more autonomous right now, so it is the possibility to do a lot onboard the vehicle and to calculate the burns so they are not consuming a lot of fuel," said veteran cosmonaut Sergei Krikalev, vice president of Russia's RSC Energia spaceflight company in charge of manned spaceflights.
The three new space station crewmembers will join an existing crew trio to complete the Expedition 35 crew aboard the International Space Station. When that mission changes over to Expedition 36 in May, Vinogradov will take over as commander of the station.
Cassidy and Vinogradov are veteran spaceflyers, but Misurkin will be making his first trip to orbit. The three will spend about six months in space, returning to Earth in September.
"I think it should be the most exciting trip in my life," Misurkin said.
Follow Clara Moskowitz @ClaraMoskowitz and Google+. Follow us@Spacedotcom, Facebook and Google+. Original article onSPACE.com.
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A DNA test can reveal what your mutt’s made of
Posted: at 4:01 pm
Published: Tuesday, March 5, 2013, 12:01 a.m.
All she knew was that he was the red-hot retriever prancing around the neighborhood.
So, she had a DNA test done.
It was obvious that Leila's mom, a mixed-breed who belonged to her in-laws, had some border collie, but McKee wasn't sure what else. She suspected Leila's dad was likely the product of some heat-of-the-moment mixed matings as well.
A drop of blood revealed more than Leila's pedigree, or lack of. "You can find out what kind of medical conditions they might run into," said McKee, a receptionist at a Mukilteo vet clinic. "Or how big the dog might get."
DNA analysis showed Leila's dad was half Labrador and her mom half border collie. Well, that explained the pup's bossiness and the spring in her step.
Her parents' other halves were of mixed breed ancestry, as was Leila's.
The DNA blood test, which distinguishes more than 235 breed types, determined the five next best breed matches in Leila's makeup were: Argentine dogo (17.75 percent); Russian wolfhound (10.88 percent); Akita (5.4 percent); Great Dane (4.75 percent); and Cesky terrier (2.95 percent).
Health risks for Leila's main breeds include exercise-induced collapse, drug sensitivity, narcolepsy, skeletal dysplasia and eye problems.
So far, she's a healthy, frisky 4-year-old who keeps a nose in everything that goes on with McKee's two kids and husband at their Marysville home.
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A DNA test can reveal what your mutt's made of
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DNA ties slain would-be rapist to 1990 California killing
Posted: at 4:01 pm
By Larry Altman,The Daily Breeze
TORRANCE, Calif. - Kevin T. Kemp's blood sample sat in a coroner's office refrigerator, pretty much forgotten.
But 23 years after the fluid was drawn from Kemp's dead body, Torrance police have used the sample to solve a murder in Venice that was long ago put on the "cold case" shelf.
Discovering the blood in April, detectives and Sheriff's Department crime lab officials examined the sample to determine its DNA code to see if it matched any other crimes.
Kemp's DNA revealed that he killed a man in Venice in 1990, just three weeks before a Torrance woman shot him to death when he attacked her in front of her home, Torrance police Sgt. Robert Watt said.
Kemp's blood matched the forensic evidence found on the Venice victim's body, allowing Los Angeles police detectives to close another case, Torrance police Sgt. Robert Watt said.
The 33-year-old Hawthorne man died Sept. 8, 1990, shortly after he ambushed the 28-year-old woman in an apparent attempt to rape her.
Police at the time said Kemp randomly attacked the woman in her driveway, wrapping a canvas strap around her neck. He tried to drag her toward his car, but she fought back.
Kicking and screaming as she scraped along the ground with the strap tugging at her neck, the woman reached into her purse, where a .22-caliber handgun was concealed inside.
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DNA ties slain would-be rapist to 1990 California killing
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DNA suggests dogs were tamed 33,000 years ago
Posted: at 4:01 pm
Ovodov et al. / PLOS ONE
The skull of a 33,000-year-old canid was found in a cave in the Altai Mountains of southern Siberia.
By Stephanie Pappas LiveScience
A canine skull found in the Altai Mountains of Siberia is more closely related to modern domestic dogs than to wolves, a new DNA analysis reveals.
The findings could indicate that dogs were domesticated around 33,000 years ago. The point at which wolves made the transition to man's best friend is hotly contested, though dogs were well-established in human societies by about 10,000 years ago. Dogs and humans were buried together in Germany about 14,000 years ago, a strong hint of domestication, but genetic studies have pinpointed the origin of dog domestication in both China and the Middle East.
The Altai specimen, a well-preserved skull, represents one of the two oldest possible domestic dogs ever found. Another possible domestic dog fossil, dated to approximately 36,000 years ago, was found in Goyet Cave in Belgium.
Anatomical examinations of these skulls suggest they are more doglike than wolflike. To confirm, researchers from the Russian Academy of Sciences and their colleagues drilled a tiny amount of bone from the Altai dog's incisor and jaw, and analyzed its DNA. They conducted all of the work in an isolated lab and used extra precautions to prevent contamination, as ancient DNA is extremely fragile.
The researchers then compared the genetic sequences from the Altai specimen with sequences from 72 modern dogs of 70 different breeds, 30 wolves, four coyotes and 35 prehistoric canid species from the Americas. [10 Breeds: What Your Dog Says About You]
They found that the Altai canid is more closely related to modern domestic dogs than to modern wolves, as its skull shape had previously suggested. That means that the Altai canid was an ancient dog, not an ancient wolf though it had likely diverged from the wolf line relatively recently, the researchers report Wednesdayin the journal PLOS ONE.
If the Altai dog was really domesticated, it would push back the origin of today's house pets more than 15,000 years and move the earliest domestication out of the Middle East or East Asia, as previous studies have suggested. However, the analysis was limited to only a portion of the genome, the researchers wrote.
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DNA ancestry tests branded ‘meaningless’
Posted: at 4:01 pm
At the recent Who Do You Think You Are? Live roadshow in London, customers were offered a range of DNA tests claiming to determine whether they were related to Richard III or descended from Roman soldiers.
A warning about the accuracy of the tests was made by the Sense About Science campaign group, which said "such histories are either so general as to be personally meaningless or they are just speculation from thin evidence."
The warning was backed by a number of leading genetics experts. Steve Jones, Emeritus Professor of Human Genetics at UCL said: On a long trudge through history two parents, four great-grandparents, and so on very soon everyone runs out of ancestors and has to share them.
"As a result, almost every Briton is a descendant of Viking hordes, Roman legions, African migrants, Indian Brahmins, or anyone else they fancy.
His colleague Prof Mark Thomas said: "These claims are usually planted by the companies that provide these so-called tests and are not backed up by published scientific research. This is business, and the business is genetic astrology.
Tracey Brown, Director of Sense About Science added: Genetics researchers are telling us that you are better off digging around in your loft than doing a DNA ancestry test if you want to find out about your family tree."
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DNA ancestry ‘astrology’ claim
Posted: at 4:01 pm
6 March 2013 Last updated at 22:05 ET By Pallab Ghosh Science correspondent, BBC News
Scientists have described some services provided by companies tracing ancestry using DNA as akin to astrology.
Some test findings tell people that they have links to groups such as Vikings, to particular migrations of people and sometimes to famous figures such as Napoleon or Cleopatra
But researchers working with a campaign group say DNA tests cannot provide accurate information about ancestry.
Ancestry companies insist they are able to provide a valuable service.
Almost every Briton is a descendant of Viking hordes, Roman legions, African migrants, Indian Brahmins, or anyone else they fancy
An increasing number of companies are offering to profile the genetic history of individuals based on a DNA sample for around 200.
But in a public guide, published by Sense About Science, Prof David Balding and Prof Mark Thomas of University College London warn that such histories are either so general as to be "personally meaningless or they are just speculation from thin evidence".
The scientists say that genetic profiles cannot provide accurate information about an individual's ancestry.
They say "the genetic ancestry business uses a phenomenon well-known in other areas such as horoscopes, where general information is interpreted as being more personal than it really is".
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Vincenzo Costanzo – Novel molecular insights on vertebrate genome stability maintenance – Video
Posted: at 4:00 pm
Vincenzo Costanzo - Novel molecular insights on vertebrate genome stability maintenance
Vincenzo Costanzo - Cancer Research UK The molecular aspect of how cells maintain a stable character shows that cancer cells cannot maintain the structure of their DNA. The cause of this is the failure of a surveillance system in the cells DNA which causes the chromosomes to lose their structure. Dr Costanzo elaborates on how this will factor into his laboratory #39;s focus of DNA metabolism and DNA damage response in vertebrate organisms. Recordered during the IFOM - Kyoto university Joint Symposium, October 2012. For more info visit ifom.eu
By: IFOMeu
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Scientists at A*STAR’s Genome Institute of Singapore catch evolving germs and cancer cells early
Posted: at 4:00 pm
Public release date: 6-Mar-2013 [ | E-mail | Share ]
Contact: Winnie Lim limcp2@gis.a-star.edu.sg 656-808-8013 Agency for Science, Technology and Research (A*STAR), Singapore
Scientists at A*STAR's Genome Institute of Singapore (GIS) have developed a novel technique to precisely monitor and study the evolution of micro-organisms such as viruses and bacteria. This is an extremely important capability as it allows scientists to investigate if new drugs designed to kill them are working, and catch the development of resistance early on.
Micro-organisms and cancer cells evolve more quickly than normal human cells as their rapid life-cycles enable faster selection of advantageous mutations. Previously, scientists have had to wait for the selection process to reach maturity before they can observe mutations and assess their impact.
In this new work, led by GIS Principal Investigators Dr Niranjan Nagarajan and Dr Martin Hibberd, the sensitivity of detecting mutations has been significantly increased, thus making it possible to "catch evolution in real time". Being able to do this means that scientists can now observe the process of mutation as it happens, and catch how the organism or cancer cell develops resistance to drugs used.
The novel method, known as LoFreq, was achieved by combining deep sequencing of DNA with computational analysis to detect mutations at extremely "LOw FREQuency" in as few as one in 1000 cells. This approach is currently being used at the GIS to study the dengue virus, characterizing subtle shifts in the viral genome in response to new antiviral drugs.
Dr Niranjan said, "LoFreq has really allowed us to look at viral genome evolution in fine detail and we hope to use it construct better models for transmission of the dengue virus. We can also now identify key functional regions in viral genomes by highlighting spots that never mutate or mutate rapidly. In ongoing work, we are developing extensions to LoFreq that can better characterize mutations in Cancer."
Executive Director of GIS, Prof Ng Huck Hui said, "This innovation in the computational space highlights GIS's effort in developing unique capabilities in analyzing increasingly complex next-generation sequencing datasets. We expect that LoFreq will have wide utility in the analysis of viral, bacterial and cancer genome data."
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After the Cancer Genome Atlas
Posted: at 4:00 pm
The Cancer Genome Atlas is set to finish up next year after sequencing some 10,000 samples from about 20 different cancer types. TCGA has found, ScienceInsider notes, a number of new cancer genes and confirmed others that were previously identified. But with its price tag reaching over $375 million, some critics say it has been too expensive, though many disagree.
At a National Cancer Institute meeting earlier this week, Louis Staudt and Stephen Chanock discussed what could be a next step by sequencing even more samples, say 10,000 per tumor type, researchers could uncover rare variants contributing to the disease, ScienceInsider adds. Further, it could enable studies examining the interplay of genetics and environmental factors.
However, with the agency facing a 5 percent budget cut, such a grand project might not be realized. ScienceInsider also notes that some skeptics said that the project might reach a level of "diminishing returns." According to ScienceInsider Cold Spring Harbor Laboratory's Bruce Stillman noted that he is a supporter of TCGA, but that taking it to such a new scale "is not very sensible at the moment."
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