{"id":26763,"date":"2014-03-11T17:43:56","date_gmt":"2014-03-11T21:43:56","guid":{"rendered":"http:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/whole-genome-sequencing-for-clinical-use-faces-many-challenges-stanford-study-finds\/"},"modified":"2014-03-11T17:43:56","modified_gmt":"2014-03-11T21:43:56","slug":"whole-genome-sequencing-for-clinical-use-faces-many-challenges-stanford-study-finds","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/transhuman-news-blog\/genome\/whole-genome-sequencing-for-clinical-use-faces-many-challenges-stanford-study-finds\/","title":{"rendered":"Whole-genome sequencing for clinical use faces many challenges, Stanford study finds"},"content":{"rendered":"<p><p>    PUBLIC RELEASE DATE:  <\/p>\n<p>    11-Mar-2014  <\/p>\n<p>    Contact: Krista Conger    <a href=\"mailto:kristac@stanford.edu\">kristac@stanford.edu<\/a>    650-725-5371    Stanford    University Medical Center<\/p>\n<p>    STANFORD, Calif.  Whole-genome sequencing has been touted as a    game-changer in personalized medicine. Clinicians can identify    increases in disease risk for specific patients, as well as    their responsiveness to certain drugs, by determining the    sequence of the billions of building blocks, called    nucleotides, that make up their DNA.  <\/p>\n<p>    Now, researchers at the Stanford University School of Medicine    have discovered that although life-changing discoveries can be    made, significant challenges must be overcome before    whole-genome sequencing can be routinely clinically useful. In    particular, they found that individual risk determination would    benefit from a degree of improved sequencing accuracy in    disease-associated genes. Furthermore, up to 100 hours of    manual assessment by professional genetic counselors or    informatics specialists is required for detailed genome    analysis.  <\/p>\n<p>    Although the technique was once prohibitively expensive,    plummeting costs have been widely expected to rapidly usher    whole-genome sequencing into the arena of mainstream health    care. However, the researchers' findings indicate that clinical    advances from whole-genome sequencing are, at least in the near    future, likely to be significantly more expensive and    labor-intensive than some patients and clinicians may have been    led to believe.  <\/p>\n<p>    \"We need to be very honest about what we can and cannot do at    this point in time,\" said Euan Ashley, MD, associate professor    of medicine and of genetics, one of three senior authors of the    paper. \"It's clear that if we sequence enough cases, we can    change someone's life. But with this opportunity comes the    responsibility to do this right. Our hope is that the    identification of specific hurdles will allow researchers in    this field to focus their efforts on overcoming them to make    this technique clinically useful.\"  <\/p>\n<p>    The paper will be published March 12 in the Journal of the    American Medical Association. Michael Snyder, PhD,    professor and chair of genetics, and Thomas Quertermous, MD,    professor of medicine, also share senior authorship of the    paper. Postdoctoral scholar and cardiology fellow Frederick    Dewey, MD, genetic counselor Megan Grove, CGC, and postdoctoral    scholar Cuiping Pan, PhD, share lead authorship of the paper.  <\/p>\n<p>    The researchers analyzed the whole genomes of 12 healthy people    and took note of the degree of sequencing accuracy necessary to    make clinical decisions in individuals, the time it took to    manually analyze each person's results and the projected costs    of recommended follow-up medical tests.  <\/p>\n<p>    \"This has been an important project for the Stanford team for a    number of reasons, not the least of which is that it represents    the initial genetics effort to make use of the Stanford    GenePool Biobank,\" said Quertermous, the William G. Irwin    Professor in Cardiovascular Medicine. GenePool was recently    launched to promote genomic research in a clinical setting and    to improve patient care; the 12 people in the study were the    first participants in the effort.  <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Go here to read the rest:<br \/>\n<a target=\"_blank\" href=\"http:\/\/www.eurekalert.org\/pub_releases\/2014-03\/sumc-wsf030914.php\/RK=0\/RS=w5lYy7PuF7_pZq8WEtOV973Bur0-\" title=\"Whole-genome sequencing for clinical use faces many challenges, Stanford study finds\">Whole-genome sequencing for clinical use faces many challenges, Stanford study finds<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> PUBLIC RELEASE DATE: 11-Mar-2014 Contact: Krista Conger <a href=\"mailto:kristac@stanford.edu\">kristac@stanford.edu<\/a> 650-725-5371 Stanford University Medical Center STANFORD, Calif. Whole-genome sequencing has been touted as a game-changer in personalized medicine. Clinicians can identify increases in disease risk for specific patients, as well as their responsiveness to certain drugs, by determining the sequence of the billions of building blocks, called nucleotides, that make up their DNA.  <a href=\"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/transhuman-news-blog\/genome\/whole-genome-sequencing-for-clinical-use-faces-many-challenges-stanford-study-finds\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[25],"tags":[],"class_list":["post-26763","post","type-post","status-publish","format-standard","hentry","category-genome"],"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts\/26763"}],"collection":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/comments?post=26763"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts\/26763\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/media?parent=26763"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/categories?post=26763"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/tags?post=26763"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}