{"id":196376,"date":"2017-06-03T12:31:53","date_gmt":"2017-06-03T16:31:53","guid":{"rendered":"http:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/solution-darwinian-evolution-explains-lamarckism-quanta-magazine\/"},"modified":"2017-06-03T12:31:53","modified_gmt":"2017-06-03T16:31:53","slug":"solution-darwinian-evolution-explains-lamarckism-quanta-magazine","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/evolution\/solution-darwinian-evolution-explains-lamarckism-quanta-magazine\/","title":{"rendered":"Solution: &#8216;Darwinian Evolution Explains Lamarckism&#8217; &#8211; Quanta Magazine"},"content":{"rendered":"<p><p>    Our     May Insights puzzle was inspired by recent discoveries of    some rare, intriguing patterns of inheritance that hark back to    Jean-Baptiste    Lamarcks theory of evolution and its emphasis on the    inheritance of acquired characteristics. Elementary textbooks    often present Lamarcks theory as a failed 19th-century rival    to Charles Darwins theory of evolution by natural selection.    But reality, as usual, is far more complicated. There is indeed    a great deal of evidence that most acquired characteristics are    not inherited, but as the new findings have shown, this    proscription is not absolute. The famous     verkalix study, for example, showed that men who were    exposed to a poor food supply between the ages of 9 and 12 were    found, two generations later, to have conferred a measurably    lower risk of diabetes and cardiovascular death to their    grandchildren. Adaptive Lamarckian inheritance does seem to be    possible, and epigenetic mechanisms for it have been found.    These mechanisms modify DNA in ways that differ from those of    heredity.  <\/p>\n<p>    But at a deeper level this kind of inheritance can be naturally    selected for in the traditional Darwinian way, provided certain    environmental conditions are satisfied. So Darwinian natural    selection remains the fundamental basis of evolution and can    produce Lamarckian inheritance: The theories are not rivals    after all! Using simple models, our puzzles show how natural    selection can sustain Lamarckian inheritance. The requirement    is that environmental conditions, such as famines, follow    patterns that persist across several generations and are    repeated over long stretches of evolutionary time.  <\/p>\n<p>      Imagine there exists an animal that has a new generation      every year. Every normal individual has an average of 1.6      surviving offspring in a normal year, which can be defined as      the animals fitness (lets call itf), after      which the animal dies. During a famine      year,ffalls to 1.3.Now suppose      there are a bunch of smaller individuals      whosefvalues are 1.5 in normal years but      1.35 in famine years: Their smaller food requirement helps      them survive famines better. How long would a famine have to      last for the small individuals to do better than normal ones?      How many famine years before small individuals make up 90      percent of the population?    <\/p>\n<p>    The basic mathematics of natural selection is simple. For every    group, you just multiply the fitness numbers across multiple    generations. You then find the ratio between the numbers you    obtain for the different groups. This gives you their relative    populations, assuming that the initial numbers were the same.    (Note that these numbers dont signify the actual populations    of each group, but they indicate their relative success. If    f is larger than 1, then the product may grow    extremely large after many generations. In the real world,    there are many checks on the population of a species, so at    equilibrium, the population is actually stable. What does    change are the relative ratios between the populations of the    different groups, which are accurately reflected in the above    calculation.)  <\/p>\n<p>    For Question 1, assuming we start from a normal year, we have    to find a positive integer n such that 1.5 x    1.35n > 1.6 x 1.3n.    You can do this analytically using logarithms or by setting up    a spreadsheet and reading off the values. After two years of    famine, the smaller individuals already have a population over    50 percent. (If you want to bookend the famine with normal    years on either side, then it requires four years of famine for    the small individuals to be ahead of the normal ones a year    after the famine is over.)  <\/p>\n<p>    As     Ty Rex noted, for smalls to make up more than 90 percent    of the population, the number of famine years needs to be    greater than [log(9) + log(1.6\/1.5)]\/log(1.35\/1.3) ~ 59.9. So,    60 famine years are needed for smalls to make up 90 percent of    the population.  <\/p>\n<p>      Suppose there exists an initially normal mutant group of      individuals called Epi2s, whose germ cells are affected by a      year of famine in such a way that their progeny changes to      the small type for two generations before they revert back to      normal in the third generation, through epigenetic      mechanisms. Consider a 13-year period that starts and ends      with normal years but has a one-year famine, two two-year      famines and a three-year famine in between. Which of the      three groups (normals, smalls, Epi2s) will be most      successful? Are there famine patterns in which Epi2s      overwhelm the other two groups over the very long term?    <\/p>\n<p>    As a couple of commenters noted, there is an ambiguity here:    What happens when Epi2s that have changed to the small type    encounter a year of famine? Is their status reset and do they    continue to be smalls for another two years, or do they    continue on their original timetable and revert to normals two    years after the original famine year? Most commenters assumed    the former. I had the latter in mind, because otherwise the    Epi2s behave very much like smalls in extended famines. In any    case, the choice of the assumption does not change the answer    to this question. As     Ty Rex noted, if we start with equal populations, the    ratios between the normals, smalls and Epi2s become 85.5 to    83.8 to 86.1, assuming Epi2s reset, so the Epi2s do best by a    small margin. If there are no resets, then Epi2s do even    better, their relative ratio going up to 87.4. With no resets,    Epi2s are adapted to famines that are three years long, so    the pattern NFFFNFFF gives them an even larger advantage over    the other two groups. With this pattern, Epi2s will make up 90    percent of an initially evenly divided population in 329 years.  <\/p>\n<p>      Lets add another type of animal to the above: the Epi1s,      which like the Epi2s switch to small progeny after a famine,      but in this case the progeny revert back to normal after just      one generation. Over a period of 20 years, can you come up      with a famine-year schedule such that all four types of      animals (normals, smalls, Epi1s and Epi2s) exist in virtual      equilibrium over this time period?    <\/p>\n<p>    For this question, note that the numbers of the normal and the    small groups are only affected by the number of famine and    nonfamine years and not their temporal arrangement. So we have    to find a positive number of nonfamine years n such    that 1.6n1.320-n is as    close as possible to    1.5n1.3520-n. This    happens for seven nonfamine and 13 famine years, which gives a    relative ratio of 813 to 845 for normals to smalls. How do the    years need to be arranged to equalize the numbers of Epi1s and    Epi2s? As noted above, without resets, Epi2s are best adapted    to famines that last three years, and similarly, Epi1s are best    adapted to famines that last two years. So our 20-year pattern    needs to have famines of both these durations. The pattern NFF    NFFF NFF NFFF NFF NFN meets all the conditions mentioned and    gives relative scores of 809 for Epi1s and 817 for Epi2s on the    above scale, which are both within 0.5 percent of the number    for normals. This seems to be the best approach to virtual    equilibrium.  <\/p>\n<p>    So what these simple models teach us is that it is possible to    come up with environmental conditions that will lead natural    selection to favor epigenetic inheritance across generations if    the selecting factor (here, famine) occurred frequently enough    in an animals evolutionary history in the right pattern.    Furthermore, there can be patterns that maintain different    groups of the species at relatively constant numbers, ready to    take advantage of a change in climate, rendering the species as    a whole more stable and prepared for several different    eventualities.  <\/p>\n<p>    As I discussed in the puzzle column, scientists have found    molecular mechanisms that can implement these transgenerational    changes by suppressing the activity of certain genes through    the attachment of methyl groups (DNA methylation) or through    changes in the configuration of the protein that packages the    DNA (histone modification). Transgenerational inheritance is    even easier in small organisms that do not go through a germ    cell stage, such as bacteria. These organisms can use even more    efficient mechanisms that have allowed the evolution of the    spectacular DNA-cutting system called     CRISPR, which is currently revolutionizing genetic    engineering. This system uses bits of DNA called     transposons or jumping genes that can jump around from    one location to another in genomes. Its amazing what natural    selection can achieve in evolutionary time!  <\/p>\n<p>    Thanks to all who participated in this Insights puzzle. I    enjoyed reading your comments and especially     my dialogue with     Josh Mitteldorf. The Quanta T-shirt goes to Ty    Rex. Congratulations!  <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Read this article:<\/p>\n<p><a target=\"_blank\" rel=\"nofollow\" href=\"https:\/\/www.quantamagazine.org\/puzzle-solution-darwinian-evolution-explains-lamarckism-20170602\/\" title=\"Solution: 'Darwinian Evolution Explains Lamarckism' - Quanta Magazine\">Solution: 'Darwinian Evolution Explains Lamarckism' - Quanta Magazine<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> Our May Insights puzzle was inspired by recent discoveries of some rare, intriguing patterns of inheritance that hark back to Jean-Baptiste Lamarcks theory of evolution and its emphasis on the inheritance of acquired characteristics.  <a href=\"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/evolution\/solution-darwinian-evolution-explains-lamarckism-quanta-magazine\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[187748],"tags":[],"class_list":["post-196376","post","type-post","status-publish","format-standard","hentry","category-evolution"],"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts\/196376"}],"collection":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/comments?post=196376"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts\/196376\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/media?parent=196376"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/categories?post=196376"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/tags?post=196376"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}