{"id":173791,"date":"2016-09-20T19:07:13","date_gmt":"2016-09-20T23:07:13","guid":{"rendered":"http:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/understanding-human-genetic-variation-nih-curriculum\/"},"modified":"2016-09-20T19:07:13","modified_gmt":"2016-09-20T23:07:13","slug":"understanding-human-genetic-variation-nih-curriculum","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/transhuman-news-blog\/human-genetics\/understanding-human-genetic-variation-nih-curriculum\/","title":{"rendered":"Understanding Human Genetic Variation &#8211; NIH Curriculum &#8230;"},"content":{"rendered":"<p><p>    Genetics is the scientific study of inherited variation.    Human genetics, then, is the scientific study of    inherited human variation.  <\/p>\n<p>    Why study human genetics? One reason is simply an interest in    better understanding ourselves. As a branch of genetics, human    genetics concerns itself with what most of us consider to be    the most interesting species on earth: Homo sapiens. But    our interest in human genetics does not stop at the boundaries    of the species, for what we learn about human genetic variation    and its sources and transmission inevitably contributes to our    understanding of genetics in general, just as the study of    variation in other species informs our understanding of our    own.  <\/p>\n<p>    A second reason for studying human genetics is its practical    value for human welfare. In this sense, human genetics is more    an applied science than a fundamental science. One benefit of    studying human genetic variation is the discovery and    description of the genetic contribution to many human diseases.    This is an increasingly powerful motivation in light of our    growing understanding of the contribution that genes make to    the development of diseases such as cancer, heart disease, and    diabetes. In fact, society has been willing in the past and    continues to be willing to pay significant amounts of money for    research in this area, primarily because of its perception that    such study has enormous potential to improve human health. This    perception, and its realization in the discoveries of the past    20 years, have led to a marked increase in the number of people    and organizations involved in human genetics.  <\/p>\n<p>    This second reason for studying human genetics is related to    the first. The desire to develop medical practices that can    alleviate the suffering associated with human disease has    provided strong support to basic research. Many basic    biological phenomena have been discovered and described during    the course of investigations into particular disease    conditions. A classic example is the knowledge about human sex    chromosomes that was gained through the study of patients with    sex chromosome abnormalities. A more current example is our    rapidly increasing understanding of the mechanisms that    regulate cell growth and reproduction, understanding that we    have gained primarily through a study of genes that, when    mutated, increase the risk of cancer.  <\/p>\n<p>    Likewise, the results of basic research inform and stimulate    research into human disease. For example, the development of    recombinant DNA techniques () rapidly transformed the study of    human genetics, ultimately allowing scientists to study the    detailed structure and functions of individual human genes, as    well as to manipulate these genes in a variety of previously    unimaginable ways.  <\/p>\n<p>        Recombinant techniques have transformed the study of human        genetics.      <\/p>\n<p>    A third reason for studying human genetics is that it gives us    a powerful tool for understanding and describing human    evolution. At one time, data from physical anthropology    (including information about skin color, body build, and facial    traits) were the only source of information available to    scholars interested in tracing human evolutionary history.    Today, however, researchers have a wealth of genetic data,    including molecular data, to call upon in their work.  <\/p>\n<p>      Two research approaches were historically important in      helping investigators understand the biological basis of      heredity. The first of these approaches, transmission      genetics, involved crossing organisms and studying the      offsprings' traits to develop hypotheses about the mechanisms      of inheritance. This work demonstrated that in some organisms      at least, heredity seems to follow a few definite and rather      simple rules.    <\/p>\n<p>      The second approach involved using cytologic techniques to      study the machinery and processes of cellular reproduction.      This approach laid a solid foundation for the more conceptual      understanding of inheritance that developed as a result of      transmission genetics. By the early 1900s, cytologists had      demonstrated that heredity is the consequence of the genetic      continuity of cells by cell division, had identified the      gametes as the vehicles that transmit genetic information      from one generation to another, and had collected strong      evidence for the central role of the nucleus and the      chromosomes in heredity.    <\/p>\n<p>      As important as they were, the techniques of transmission      genetics and cytology were not enough to help scientists      understand human genetic variation at the level of detail      that is now possible. The central advantage that today's      molecular techniques offer is that they allow researchers to      study DNA directly. Before the development of these      techniques, scientists studying human genetic variation were      forced to make inferences about molecular differences from      the phenotypes produced by mutant genes. Furthermore, because      the genes associated with most single-gene disorders are      relatively rare, they could be studied in only a small number      of families. Many of the traits associated with these genes      also are recessive and so could not be detected in people      with heterozygous genotypes. Unlike researchers working with      other species, human geneticists are restricted by ethical      considerations from performing experimental, \"at-will\"      crosses on human subjects. In addition, human generations are      on the order of 20 to 40 years, much too slow to be useful in      classic breeding experiments. All of these limitations made      identifying and studying genes in humans both tedious and      slow.    <\/p>\n<p>      In the last 50 years, however, beginning with the discovery      of the structure of DNA and accelerating significantly with      the development of recombinant DNA techniques in the      mid-1970s, a growing battery of molecular techniques has made      direct study of human DNA a reality. Key among these      techniques are restriction analysis and molecular      recombination, which allow researchers to cut and rejoin DNA      molecules in highly specific and predictable ways;      amplification techniques, such as the polymerase chain      reaction (PCR), which make it possible to make unlimited      copies of any fragment of DNA; hybridization techniques, such      as fluorescence in situ hybridization, which allow scientists      to compare DNA samples from different sources and to locate      specific base sequences within samples; and the automated      sequencing techniques that today are allowing workers to      sequence the human genome at an unprecedented rate.    <\/p>\n<p>      On the immediate horizon are even more powerful techniques,      techniques that scientists expect will have a formidable      impact on the future of both research and clinical genetics.      One such technique, DNA chip technology (also called      DNA microarray technology), is a revolutionary new tool      designed to identify mutations in genes or survey expression      of tens of thousands of genes in one experiment.    <\/p>\n<p>      In one application of this technology, the chip is designed      to detect mutations in a particular gene. The DNA microchip      consists of a small glass plate encased in plastic. It is      manufactured using a process similar to the process used to      make computer microchips. On its surface, it contains      synthetic single-stranded DNA sequences identical to that of      the normal gene and all possible mutations of that gene. To      determine whether an individual possesses a mutation in the      gene, a scientist first obtains a sample of DNA from the      person's blood, as well as a sample of DNA that does not      contain a mutation in that gene. After denaturing, or      separating, the DNA samples into single strands and cutting      them into smaller, more manageable fragments, the scientist      labels the fragments with fluorescent dyes: the person's DNA      with red dye and the normal DNA with green dye. Both sets of      labeled DNA are allowed to hybridize, or bind, to the      synthetic DNA on the chip. If the person does not have a      mutation in the gene, both DNA samples will hybridize      equivalently to the chip and the chip will appear uniformly      yellow. However, if the person does possess a mutation, the      mutant sequence on the chip will hybridize to the patient's      sample, but not to the normal DNA, causing it (the chip) to      appear red in that area. The scientist can then examine this      area more closely to confirm that a mutation is present.    <\/p>\n<p>      DNA microarray technology is also allowing scientists to      investigate the activity in different cell types of thousands      of genes at the same time, an advance that will help      researchers determine the complex functional relationships      that exist between individual genes. This type of analysis      involves placing small snippets of DNA from hundreds or      thousands of genes on a single microscope slide, then      allowing fluorescently labeled mRNA molecules from a      particular cell type to hybridize to them. By measuring the      fluorescence of each spot on the slide, scientists can      determine how active various genes are in that cell type.      Strong fluorescence indicates that many mRNA molecules      hybridized to the gene and, therefore, that the gene is very      active in that cell type. Conversely, no fluorescence      indicates that none of the cell's mRNA molecules hybridized      to the gene and that the gene is inactive in that cell type.    <\/p>\n<p>      Although these technologies are still relatively new and are      being used primarily for research, scientists expect that one      day they will have significant clinical applications. For      example, DNA chip technology has the potential to      significantly reduce the time and expense involved in genetic      testing. This technology or others like it may one day help      make it possible to define an individual's risk of developing      many types of hereditary cancer as well as other common      disorders, such as heart disease and diabetes. Likewise,      scientists may one day be able to classify human cancers      based on the patterns of gene activity in the tumor cells and      then be able to design treatment strategies that are targeted      directly to each specific type of cancer.    <\/p>\n<p>      Homo sapiens is a relatively young species and has not      had as much time to accumulate genetic variation as have the      vast majority of species on earth, most of which predate      humans by enormous expanses of time. Nonetheless, there is      considerable genetic variation in our species. The human      genome comprises about 3  109 base pairs of DNA,      and the extent of human genetic variation is such that no two      humans, save identical twins, ever have been or will be      genetically identical. Between any two humans, the amount of      genetic variationbiochemical individualityis about .1      percent. This means that about one base pair out of every      1,000 will be different between any two individuals. Any two      (diploid) people have about 6  106 base pairs      that are different, an important reason for the development      of automated procedures to analyze genetic variation.    <\/p>\n<p>      The most common polymorphisms (or genetic differences)      in the human genome are single base-pair differences.      Scientists call these differences SNPs, for single-nucleotide      polymorphisms. When two different haploid genomes are      compared, SNPs occur, on average, about every 1,000 bases.      Other types of polymorphismsfor example, differences in copy      number, insertions, deletions, duplications, and      rearrangementsalso occur, but much less frequently.    <\/p>\n<p>      Notwithstanding the genetic differences between individuals,      all humans have a great deal of their genetic information in      common. These similarities help define us as a species.      Furthermore, genetic variation around the world is      distributed in a rather continuous manner; there are no      sharp, discontinuous boundaries between human population      groups. In fact, research results consistently demonstrate      that about 85 percent of all human genetic variation exists      within human populations, whereas about only 15      percent of variation exists between populations ().      That is, research reveals that Homo sapiens is one      continuously variable, interbreeding species. Ongoing      investigation of human genetic variation has even led      biologists and physical anthropologists to rethink      traditional notions of human racial groups. The amount of      genetic variation between these traditional classifications      actually falls below the level that taxonomists use to      designate subspecies, the taxonomic category for other      species that corresponds to the designation of race in      Homo sapiens. This finding has caused some biologists      to call the validity of race as a biological construct into      serious question.    <\/p>\n<p>          Most variation occurs within populations.        <\/p>\n<p>      Analysis of human genetic variation also confirms that humans      share much of their genetic information with the rest of the      natural worldan indication of the relatedness of all life by      descent with modification from common ancestors. The highly      conserved nature of many genetic regions across considerable      evolutionary distance is especially obvious in genes related      to development. For example, mutations in the patched      gene produce developmental abnormalities in      Drosophila, and mutations in the patched      homolog in humans produce analogous structural deformities in      the developing human embryo.    <\/p>\n<p>      Geneticists have used the reality of evolutionary      conservation to detect genetic variations associated with      some cancers. For example, mutations in the genes responsible      for repair of DNA mismatches that arise during DNA      replication are associated with one form of colon cancer.      These mismatched repair genes are conserved in evolutionary      history all the way back to the bacterium Escherichia      coli, where the genes are designated Mutl and      Muts. Geneticists suspected that this form of colon      cancer was associated with a failure of mismatch repair, and      they used the known sequences from the E. coli genes      to probe the human genome for homologous sequences. This work      led ultimately to the identification of a gene that is      associated with increased risk for colon cancer.    <\/p>\n<p>      Almost all human genetic variation is relatively      insignificant biologically; that is, it has no adaptive      significance. Some variation (for example, a neutral      mutation) alters the amino acid sequence of the resulting      protein but produces no detectable change in its function.      Other variation (for example, a silent mutation) does not      even change the amino acid sequence. Furthermore, only a      small percentage of the DNA sequences in the human genome are      coding sequences (sequences that are ultimately translated      into protein) or regulatory sequences (sequences that can      influence the level, timing, and tissue specificity of gene      expression). Differences that occur elsewhere in the DNAin      the vast majority of the DNA that has no known functionhave      no impact.    <\/p>\n<p>      Some genetic variation, however, can be positive, providing      an advantage in changing environments. The classic example      from the high school biology curriculum is the mutation for      sickle hemoglobin, which in the heterozygous state provides a      selective advantage in areas where malaria is endemic.    <\/p>\n<p>      More recent examples include mutations in the CCR5      gene that appear to provide protection against AIDS. The      CCR5 gene encodes a protein on the surface of human      immune cells. HIV, the virus that causes AIDS, infects immune      cells by binding to this protein and another protein on the      surface of those cells. Mutations in the CCR5 gene      that alter its level of expression or the structure of the      resulting protein can decrease HIV infection. Early research      on one genetic variant indicates that it may have risen to      high frequency in Northern Europe about 700 years ago, at      about the time of the European epidemic of bubonic plague.      This finding has led some scientists to hypothesize that the      CCR5 mutation may have provided protection against infection      by Yersinia pestis, the bacterium that causes plague.      The fact that HIV and Y. pestis both infect      macrophages supports the argument for selective advantage of      this genetic variant.    <\/p>\n<p>      The sickle cell and AIDS\/plague stories remind us that the      biological significance of genetic variation depends on the      environment in which genes are expressed. It also reminds us      that differential selection and evolution would not proceed      in the absence of genetic variation within a species.    <\/p>\n<p>      Some genetic variation, of course, is associated with      disease, as classic single-gene disorders such as sickle cell      disease, cystic fibrosis, and Duchenne muscular dystrophy      remind us. Increasingly, research also is uncovering genetic      variations associated with the more common diseases that are      among the major causes of sickness and death in developed      countriesdiseases such as heart disease, cancer, diabetes,      and psychiatric disorders such as schizophrenia and bipolar      disease (manic-depression). Whereas disorders such as cystic      fibrosis or Huntington disease result from the effects of      mutation in a single gene and are evident in virtually all      environments, the more common diseases result from the      interaction of multiple genes and environmental variables.      Such diseases therefore are termed polygenic and      multifactorial. In fact, the vast majority of human      traits, diseases or otherwise, are multifactorial.    <\/p>\n<p>      The genetic distinctions between relatively rare single-gene      disorders and the more common multifactorial diseases are      significant. Genetic variations that underlie single-gene      disorders generally are relatively recent, and they often      have a major, detrimental impact, disrupting homeostasis in      significant ways. Such disorders also generally exact their      toll early in life, often before the end of childhood. In      contrast, the genetic variations that underlie common,      multifactorial diseases generally are of older origin and      have a smaller, more gradual effect on homeostasis. They also      generally have their onset in adulthood. The last two      characteristics make the ability to detect genetic variations      that predispose\/increase risk of common diseases especially      valuable because people have time to modify their behavior in      ways that can reduce the likelihood that the disease will      develop, even against a background of genetic predisposition.    <\/p>\n<p>      As noted earlier, one of the benefits of understanding human      genetic variation is its practical value for understanding      and promoting health and for understanding and combating      disease. We probably cannot overestimate the importance of      this benefit. First, as shows, virtually every human disease      has a genetic component. In some diseases, such as Huntington      disease, Tay-Sachs disease, and cystic fibrosis, this      component is very large. In other diseases, such as cancer,      diabetes, and heart disease, the genetic component is more      modest. In fact, we do not typically think of these diseases      as \"genetic diseases,\" because we inherit not the certainty      of developing a disease, but only a predisposition to      developing it.    <\/p>\n<p>          Virtually all human diseases, except perhaps trauma, have          a genetic component.        <\/p>\n<p>      In still other diseases, the genetic component is very small.      The crucial point, however, is that it is there. Even      infectious diseases, diseases that we have traditionally      placed in a completely different category than genetic      disorders, have a real, albeit small, genetic component. For      example, as the CCR5 example described earlier illustrates,      even AIDS is influenced by a person's genotype. In fact, some      people appear to have genetic resistance to HIV infection as      a result of carrying a variant of the CCR5 gene.    <\/p>\n<p>      Second, each of us is at some genetic risk, and therefore can      benefit, at least theoretically, from the progress scientists      are making in understanding and learning how to respond to      these risks. Scientists estimate that each of us carries      between 5 and 50 mutations that carry some risk for disease      or disability. Some of us may not experience negative      consequences from the mutations we carry, either because we      do not live long enough for it to happen or because we may      not be exposed to the relevant environmental triggers. The      reality, however, is that the potential for negative      consequences from our genes exists for each of us.    <\/p>\n<p>      How is modern genetics helping us address the challenge of      human disease? As shows, modern genetic analysis of a human      disease begins with mapping and cloning the associated gene      or genes. Some of the earliest disease genes to be mapped and      cloned were the genes associated with Duchenne muscular      dystrophy, retinoblastoma, and cystic fibrosis. More      recently, scientists have announced the cloning of genes for      breast cancer, diabetes, and Parkinson disease.    <\/p>\n<p>          Mapping and cloning a gene can lead to strategies that          reduce the risk of disease (preventive medicine);          guidelines for prescribing drugs based on a person's          genotype (pharmacogenomics); procedures that alter the          affected gene (gene therapy); or drugs (more...)        <\/p>\n<p>      As also shows, mapping and cloning a disease-related gene      opens the way for the development of a variety of new health      care strategies. At one end of the spectrum are genetic tests      intended to identify people at increased risk for the disease      and recognize genotypic differences that have implications      for effective treatment. At the other end are new drug and      gene therapies that specifically target the biochemical      mechanisms that underlie the disease symptoms or even      replace, manipulate, or supplement nonfunctional genes with      functional ones. Indeed, as suggests, we are entering the era      of molecular medicine.    <\/p>\n<p>      Genetic testing is not a new health care strategy. Newborn      screening for diseases like PKU has been going on for 30      years in many states. Nevertheless, the remarkable progress      scientists are making in mapping and cloning human disease      genes brings with it the prospect for the development of more      genetic tests in the future. The availability of such tests      can have a significant impact on the way the public perceives      a particular disease and can also change the pattern of care      that people in affected families might seek and receive. For      example, the identification of the BRCA1 and      BRCA2 genes and the demonstration that particular      variants of these genes are associated with an increased risk      of breast and ovarian cancer have paved the way for the      development of guidelines and protocols for testing      individuals with a family history of these diseases.      BRCA1, located on the long arm of chromosome 17, was      the first to be isolated, and variants of this gene account      for about 50 percent of all inherited breast cancer,      or about 5 percent of all breast cancer. Variants of      BRCA2, located on the long arm of chromosome 13,      appear to account for about 30 to 40 percent of all inherited      breast cancer. Variants of these genes also increase slightly      the risk for men of developing breast, prostate, or possibly      other cancers.    <\/p>\n<p>      Scientists estimate that hundreds of thousands of women in      the United States have 1 of hundreds of significant mutations      already detected in the BRCA1 gene. For a woman with a      family history of breast cancer, the knowledge that she      carries one of the variants of BRCA1 or BRCA2      associated with increased risk can be important information.      If she does carry one of these variants, she and her      physician can consider several changes in her health care,      such as increasing the frequency of physical examinations;      introducing mammography at an earlier age; and even having      prophylactic mastectomy. In the future, drugs may also be      available that decrease the risk of developing breast cancer.    <\/p>\n<p>      The ability to test for the presence in individuals of      particular gene variants is also changing the way drugs are      prescribed and developed. A rapidly growing field known as      pharmacogenomics focuses on crucial genetic      differences that cause drugs to work well in some people and      less well, or with dangerous adverse reactions, in others.      For example, researchers investigating Alzheimer disease have      found that the way patients respond to drug treatment can      depend on which of three genetic variants of the ApoE      (Apolipoprotein E) gene a person carries. Likewise, some of      the variability in children's responses to therapeutic doses      of albuterol, a drug used to treat asthma, was recently      linked to genotypic differences in the beta-2-adrenergic      receptor. Because beta-2-adrenergic receptor agonists (of      which albuterol is one) are the most widely used agents in      the treatment of asthma, these results may have profound      implications for understanding the genetic factors that      determine an individual's response to asthma therapy.    <\/p>\n<p>      Experts predict that increasingly in the future, physicians      will use genetic tests to match drugs to an individual      patient's body chemistry, so that the safest and most      effective drugs and dosages can be prescribed. After      identifying the genotypes that determine individual responses      to particular drugs, pharmaceutical companies also likely      will set out to develop new, highly specific drugs and revive      older ones whose effects seemed in the past too unpredictable      to be of clinical value.    <\/p>\n<p>      Knowledge of the molecular structure of disease-related genes      also is changing the way researchers approach developing new      drugs. A striking example followed the discovery in 1989 of      the gene associated with cystic fibrosis (CF). Researchers      began to study the function of the normal and defective      proteins involved in order to understand the biochemical      consequences of the gene's variant forms and to develop new      treatment strategies based on that knowledge. The normal      protein, called CFTR for cystic fibrosis transmembrane      conductance regulator, is embedded in the membranes of      several cell types in the body, where it serves as a channel,      transporting chloride ions out of the cells. In CF patients,      depending on the particular mutation the individual carries,      the CFTR protein may be reduced or missing from the cell      membrane, or may be present but not function properly. In      some mutations, synthesis of CFTR protein is interrupted, and      the cells produce no CFTR molecules at all.    <\/p>\n<p>      Although all of the mutations associated with CF impair      chloride transport, the consequences for patients with      different mutations vary. For example, patients with      mutations causing absent or markedly reduced CFTR protein may      have more severe disease than patients with mutations in      which CFTR is present but has altered function. The different      mutations also suggest different treatment strategies. For      example, the most common CF-related mutation (called delta      F508) leads to the production of protein molecules (called      delta F508 CFTR) that are misprocessed and are degraded      prematurely before they reach the cell membrane. This finding      suggests that drug treatments that would enhance transport of      the defective delta F508 protein to the cell membrane or      prevent its degradation could yield important benefits for      patients with delta F508 CFTR.    <\/p>\n<p>      Finally, the identification, cloning, and sequencing of a      disease-related gene can open the door to the development of      strategies for treating the disease using the instructions      encoded in the gene itself. Collectively referred to as      gene therapy, these strategies typically involve      adding a copy of the normal variant of a disease-related gene      to a patient's cells. The most familiar examples of this type      of gene therapy are cases in which researchers use a vector      to introduce the normal variant of a disease-related gene      into a patient's cells and then return those cells to the      patient's body to provide the function that was missing. This      strategy was first used in the early 1990s to introduce the      normal allele of the adenosine deaminase (ADA) gene into the      body of a little girl who had been born with ADA deficiency.      In this disease, an abnormal variant of the ADA gene fails to      make adenosine deaminase, a protein that is required for the      correct functioning of T-lymphocytes.    <\/p>\n<p>      Although researchers are continuing to refine this general      approach to gene therapy, they also are developing new      approaches. For example, scientists hope that one very new      strategy, called chimeraplasty, may one day be used to      actually correct genetic defects that involve only a      single base change. Chimeraplasty uses specially synthesized      molecules that base pair with a patient's DNA and stimulate      the cell's normal DNA repair mechanisms to remove the      incorrect base and substitute the correct one. At this point,      chimeraplasty is still in early development and the first      clinical trials are about to get underway.    <\/p>\n<p>      Yet another approach to gene therapy involves providing new      or altered functions to a cell through the introduction of      new genetic information. For example, recent experiments have      demonstrated that it is possible, under carefully controlled      experimental conditions, to introduce genetic information      into cancer cells that will alter their metabolism so that      they commit suicide when exposed to a normally innocuous      environmental trigger. Researchers are also using similar      experiments to investigate the feasibility of introducing      genetic changes into cells that will make them immune to      infection by HIV. Although this research is currently being      done only in nonhuman primates, it may eventually benefit      patients infected with HIV.    <\/p>\n<p>      As indicates, the Human Genome Project (HGP) has      significantly accelerated the pace of both the discovery of      human genes and the development of new health care strategies      based on a knowledge of a gene's structure and function. The      new knowledge and technologies emerging from HGP-related      research also are reducing the cost of finding human genes.      For example, the search for the gene associated with cystic      fibrosis, which ended in 1989, before the inception of the      HGP, required more than eight years and $50 million. In      contrast, finding a gene associated with a Mendelian disorder      now can be accomplished in less than a year at a cost of      approximately $100,000.    <\/p>\n<p>      The last few years of research into human genetic variation      also have seen a gradual transition from a primary focus on      genes associated with single-gene disorders, which are      relatively rare in the human population, to an increasing      focus on genes associated with multifactorial diseases.      Because these diseases are not rare, we can expect that this      work will affect many more people. Understanding the genetic      and environmental bases for these multifactorial diseases      also will lead to increased testing and the development of      new interventions that likely will have an enormous effect on      the practice of medicine in the next century.    <\/p>\n<p>      What are the implications of using our growing knowledge of      human genetic variation to improve personal and public      health? As noted earlier, the rapid pace of the discovery of      genetic factors in disease has improved our ability to      predict the risk of disease in asymptomatic individuals. We      have learned how to prevent the manifestations of some of      these diseases, and we are developing the capacity to treat      others.    <\/p>\n<p>      Yet, much remains unknown about the benefits and risks of      building an understanding of human genetic variation at the      molecular level. While this information would have the      potential to dramatically improve human health, the      architects of the HGP realized that it also would raise a      number of complex ethical, legal, and social issues. Thus, in      1990 they established the Ethical, Legal, and Social      Implications (ELSI) program to anticipate and address the      ethical, legal, and social issues that arise from human      genetic research. This program, perhaps more than any other,      has focused public attention, as well as the attention of      educators, on the increasing importance of preparing citizens      to understand and contribute to the ongoing public dialogue      related to advances in genetics.    <\/p>\n<p>      Ethics is the study of right and wrong, good and bad.      It has to do with the actions and character of individuals,      families, communities, institutions, and societies. During      the last two and one-half millennia, Western philosophy has      developed a variety of powerful methods and a reliable set of      concepts and technical terms for studying and talking about      the ethical life. Generally speaking, we apply the terms      \"right\" and \"good\" to those actions and qualities that foster      the interests of individuals, families, communities,      institutions, and society. Here, an \"interest\" refers to a      participant's share or participation in a situation. The      terms \"wrong\" or \"bad\" apply to those actions and qualities      that impair interests.    <\/p>\n<p>      Ethical considerations are complex, multifaceted, and raise      many questions. Often, there are competing, well-reasoned      answers to questions about what is right and wrong, and good      and bad, about an individual's or group's conduct or actions.      Typically, these answers all involve appeals to values. A      value is something that has significance or worth in a      given situation. One of the exciting events to witness in any      discussion in ethics is the varying ways in which the      individuals involved assign values to things, persons, and      states of affairs. Examples of values that students may      appeal to in a discussion about ethics include autonomy,      freedom, privacy, sanctity of life, religion, protecting      another from harm, promoting another's good, justice,      fairness, relationships, scientific knowledge, and      technological progress.    <\/p>\n<p>      Acknowledging the complex, multifaceted nature of ethical      discussions is not to suggest that \"anything goes.\" Experts      generally agree on the following features of ethics. First,      ethics is a process of rational inquiry. It involves posing      clearly formulated questions and seeking well-reasoned      answers to those questions. For example, we can ask questions      about an individual's right to privacy regarding personal      genetic information; we also can ask questions about the      appropriateness of particular uses of gene therapy.      Well-reasoned answers to such questions constitute      arguments. Ethical analysis and argument, then, result      from successful ethical inquiry.    <\/p>\n<p>      Second, ethics requires a solid foundation of information and      rigorous interpretation of that information. For example, one      must have a solid understanding of biology to evaluate the      recent decision by the Icelandic government to create a      database that will contain extensive genetic and medical      information about the country's citizens. A knowledge of      science also is needed to discuss the ethics of genetic      screening or of germ-line gene therapy. Ethics is not      strictly a theoretical discipline but is concerned in vital      ways with practical matters.    <\/p>\n<p>      Third, discussions of ethical issues often lead to the      identification of very different answers to questions about      what is right and wrong and good and bad. This is especially      true in a society such as our own, which is characterized by      a diversity of perspectives and values. Consider, for      example, the question of whether adolescents should be tested      for late-onset genetic conditions. Genetic testing centers      routinely withhold genetic tests for Huntington disease (HD)      from asymptomatic patients under the age of 18. The rationale      is that the condition expresses itself later in life and, at      present, treatment is unavailable. Therefore, there is no      immediate, physical health benefit for a minor from a      specific diagnosis based on genetic testing. In addition,      there is concern about the psychological effects of knowing      that later in life one will get a debilitating,      life-threatening condition. Teenagers can wait until they are      adults to decide what and when they would like to know. In      response, some argue that many adolescents and young children      do have sufficient autonomy in consent and decision making      and may wish to know their future. Others argue that parents      should have the right to have their children tested, because      parents make many other medical decisions on behalf of their      children. This example illustrates how the tools of ethics      can bring clarity and rigor to discussions involving values.    <\/p>\n<p>      One of the goals of this module is to help students see how      understanding science can help individuals and society make      reasoned decisions about issues related to genetics and      health. Activity 5, Making Decisions in the Face of      Uncertainty, presents students with a case of a woman who      is concerned that she may carry an altered gene that      predisposes her to breast and ovarian cancer. The woman is      faced with numerous decisions, which students also consider.      Thus, the focus of Activity 5 is prudential decision making,      which involves the ability to avoid unnecessary risk when it      is uncertain whether an event actually will occur. By      completing the activity, students understand that uncertainty      is often a feature of questions related to genetics and      health, because our knowledge of genetics is incomplete and      constantly changing. In addition, students see that making      decisions about an uncertain future is complex. In simple      terms, students have to ask themselves, \"How bad is the      outcome and how likely is it to occur?\" When the issues are      weighed, different outcomes are possible, depending on one's      estimate of the incidence of the occurrence and how much      burden one attaches to the risk.    <\/p>\n<p>      Clearly, science as well as ethics play important roles in      helping individuals make choices about individual and public      health. Science provides evidence that can help us understand      and treat human disease, illness, deformity, and dysfunction.      And ethics provides a framework for identifying and      clarifying values and the choices that flow from these      values. But the relationships between scientific information      and human choices, and between choices and behaviors, are not      straightforward. In other words, human choice allows      individuals to choose against sound knowledge, and choice      does not require action.    <\/p>\n<p>      Nevertheless, it is increasingly difficult to deny the claims      of science. We are continually presented with great amounts      of relevant scientific and medical knowledge that is publicly      accessible. As a consequence, we can think about the      relationships between knowledge, choice, behavior, and human      welfare in the following ways:    <\/p>\n<p>      One of the goals of this module is to encourage students to      think in terms of these relationships, now and as they grow      older.    <\/p>\n<p>          Biological Sciences Curriculum Study. Teaching tools. Dubuque, IA:          Kendall\/Hunt Publishing Company; 1999.        <\/p>\n<p>          Bonwell CC, Eison JA. Washington, DC: The George          Washington University: School of Education and Human          Development; Active          learning: Creating excitement in the classroom.          1991 (ASHE-ERIC Higher Education Report No. 1)        <\/p>\n<p>          Brody CM. Collaborative or cooperative learning?          Complementary practices for instructional reform.          The Journal of Staff,          Program, & Organizational Development.          1995;12(3):134143.        <\/p>\n<p>          Harrison GA, Tanner JM, Pilbeam DR, Baker PT.          Human biology: An introduction          to human evolution, variation, growth, and          adaptability. New York: Oxford University Press;          1988.        <\/p>\n<p>          Knapp MS, Shields PM, Turnbull BJ. Academic challenge in          high-poverty classrooms. Phi Delta Kappan. 1995;76(10):770776.        <\/p>\n<p>          Lander ES. Array of hope. Supplement to nature genetics. 1999          January;21        <\/p>\n<p>          Moore JA. Science as a way of          knowing: The foundations of modern biology.          Cambridge, MA: Harvard University Press; 1993.        <\/p>\n<p>          National Institutes of Health. Congressional justification.          Bethesda, MD: Author; 1996.        <\/p>\n<p>          National Research Council. National science education          standards. Washington, DC: National Academy Press;          1996.        <\/p>\n<p>          Perkins D. Smart schools:          Better thinking and learning for every child. New          York: The Free Press; 1992.        <\/p>\n<p>          Project Kaleidoscope. What          works: Building natural science communities. Vol.          1. Washington, DC: Stamats Communications, Inc; 1991.        <\/p>\n<p>          Roblyer MD, Edwards J, Havriluk MA. Integrating educational technology into          teaching. Upper Saddle River, NJ: Prentice-Hall,          Inc; 1997.        <\/p>\n<p>          Saltus R. Tailor-made drugs. The Boston Globe. 1998 April          20        <\/p>\n<p>          Saunders WL. The constructivist perspective: Implications          and teaching strategies for science. School Science and Mathematics.          1992;92(3):136141.        <\/p>\n<p>          Sizer TR. Horace's school:          Redesigning the American high school. New York:          Houghton Mifflin Co; 1992.        <\/p>\n<p>          Vogel F, Motulsky AG. Human          genetics: Problems and approaches. 3rd ed. New          York: Springer; 1997.        <\/p>\n<p>      The following glossary was modified from the glossary on the      National Human Genome Research Institute's Web site,      available at       <a href=\"http:\/\/www.nhgri.nih.gov\" rel=\"nofollow\">http:\/\/www.nhgri.nih.gov<\/a>.    <\/p>\n<p>          One of the variant forms of a gene at a particular locus,          or location, on a chromosome. Different alleles produce          variation in inherited characteristics such as hair color          or blood type. In an individual, one form of the allele          (the dominant one) may be expressed more than another          form (the recessive one).        <\/p>\n<p>          One of 20 different kinds of small molecules that link          together in long chains to form proteins. Amino acids are          referred to as the \"building blocks\" of proteins.        <\/p>\n<p>          Gene on one of the autosomes that, if present, will          almost always produce a specific trait or disease. The          chance of passing the gene (and therefore the disease) to          children is 50-50 in each pregnancy.        <\/p>\n<p>          Chromosome other than a sex chromosome. Humans have 22          pairs of autosomes.        <\/p>\n<p>          Two bases that form a \"rung of the DNA ladder.\" The bases          are the \"letters\" that spell out the genetic code. In          DNA, the code letters are A, T, G, and C, which stand for          the chemicals adenine, thymine, guanine, and cytosine,          respectively. In base pairing, adenine always pairs with          thymine, and guanine always pairs with cytosine.        <\/p>\n<p>          Defect present at birth, whether caused by mutant genes          or by prenatal events that are not genetic.        <\/p>\n<p>          First breast cancer genes to be identified. Mutated forms          of these genes are believed to be responsible for about          one-half the cases of inherited breast cancer, especially          those that occur in younger women, and also to increase a          woman's risk for ovarian cancer. Both are tumor          suppressor genes.        <\/p>\n<p>          Diseases in which abnormal cells divide and grow          unchecked. Cancer can spread from its original site to          other parts of the body and can be fatal if not treated          adequately.        <\/p>\n<p>          Gene, located in a chromosome region suspected of being          involved in a disease, whose protein product suggests          that it could be the disease gene in question.        <\/p>\n<p>          Mutation that confers immunity to infection by HIV. The          mutation alters the structure of a receptor on the          surface of macrophages such that HIV cannot enter the          cell.        <\/p>\n<p>          Collection of DNA sequences generated from mRNA          sequences. This type of library contains only          protein-coding DNA (genes) and does not include any          noncoding DNA.        <\/p>\n<p>          Basic unit of any living organism. It is a small, watery,          compartment filled with chemicals and a complete copy of          the organism's genome.        <\/p>\n<p>          One of the thread like \"packages\" of genes and other DNA          in the nucleus of a cell. Different kinds of organisms          have different numbers of chromosomes. Humans have 23          pairs of chromosomes, 46 in all: 44 autosomes and two sex          chromosomes. Each parent contributes one chromosome to          each pair, so children get one-half of their chromosomes          from their mothers and one-half from their fathers.        <\/p>\n<p>          Process of making copies of a specific piece of DNA,          usually a gene. When geneticists speak of cloning, they          do not mean the process of making genetically identical          copies of an entire organism.        <\/p>\n<p>          Three bases in a DNA or RNA sequence that specify a          single amino acid.        <\/p>\n<p>          Hereditary disease whose symptoms usually appear shortly          after birth. They include faulty digestion, breathing          difficulties and respiratory infections due to mucus          accumulation, and excessive loss of salt in sweat. In the          past, cystic fibrosis was almost always fatal in          childhood, but treatment is now so improved that patients          commonly live to their 20s and beyond.        <\/p>\n<p>          Visual appearance of a chromo some when stained and          examined under a microscope. Particularly important are          visually distinct regions, called light and dark bands,          that give each of the chromosomes a unique appearance.          This feature allows a person's chromosomes to be studied          in a clinical test known as a karyotype, which allows          scientists to look for chromosomal alterations.        <\/p>\n<p>          Particular kind of mutation: loss of a piece of DNA from          a chromosome. Deletion of a gene or part of a gene can          lead to a disease or abnormality.        <\/p>\n<p>          Chemical inside the nucleus of a cell that carries the          genetic instructions for making living organisms.        <\/p>\n<p>          Number of chromosomes in most cells except the gametes.          In humans, the diploid number is 46.        <\/p>\n<p>          Technology that identifies mutations in genes. It uses          small glass plates that contain synthetic single-stranded          DNA sequences identical to those of a normal gene.        <\/p>\n<p>          Process by which the DNA double helix unwinds and makes          an exact copy of itself.        <\/p>\n<p>          Determining the exact order of the base pairs in a          segment of DNA.        <\/p>\n<p>          Gene that almost always results in a specific physical          characteristic (for example, a disease) even though the          patient's genome possesses only one copy. With a dominant          gene, the chance of passing on the gene (and therefore          the disease) to children is 50-50 in each pregnancy.        <\/p>\n<p>          Structural arrangement of DNA, which looks something like          an immensely long ladder twisted into a helix, or coil.          The sides of the \"ladder\" are formed by a backbone of          sugar and phosphate molecules, and the \"rungs\" consist of          nucleotide bases joined weakly in the middle by hydrogen          bonds.        <\/p>\n<p>          Particular kind of mutation: production of one or more          copies of any piece of DNA, including a gene or even an          entire chromosome.        <\/p>\n<p>          Process in which molecules (such as proteins, DNA, or RNA          fragments) can be separated according to size and          electrical charge by applying an electric current to          them. The current forces the molecules through pores in a          thin layer of gel, a firm, jellylike substance. The gel          can be made so that its pores are just the right          dimensions for separating molecules within a specific          range of sizes and shapes. Smaller fragments usually          travel further than large ones. The process is sometimes          called gel electrophoresis.        <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Follow this link:<br \/>\n<a target=\"_blank\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/books\/NBK20363\/\" title=\"Understanding Human Genetic Variation - NIH Curriculum ...\">Understanding Human Genetic Variation - NIH Curriculum ...<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> Genetics is the scientific study of inherited variation.  <a href=\"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/transhuman-news-blog\/human-genetics\/understanding-human-genetic-variation-nih-curriculum\/\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":8,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[27],"tags":[],"class_list":["post-173791","post","type-post","status-publish","format-standard","hentry","category-human-genetics"],"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts\/173791"}],"collection":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/users\/8"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/comments?post=173791"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/posts\/173791\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/media?parent=173791"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/categories?post=173791"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/wp-json\/wp\/v2\/tags?post=173791"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}