{"id":1083869,"date":"2022-08-02T14:41:58","date_gmt":"2022-08-02T18:41:58","guid":{"rendered":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/uncategorized\/bacterial-biofilm-functionalization-through-bap-amyloid-engineering-npj-biofilms-and-microbiomes-nature-com\/"},"modified":"2022-08-02T14:41:58","modified_gmt":"2022-08-02T18:41:58","slug":"bacterial-biofilm-functionalization-through-bap-amyloid-engineering-npj-biofilms-and-microbiomes-nature-com","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/prometheism-transhumanism-posthumanism\/transhuman-news-blog\/genetic-engineering\/bacterial-biofilm-functionalization-through-bap-amyloid-engineering-npj-biofilms-and-microbiomes-nature-com\/","title":{"rendered":"Bacterial biofilm functionalization through Bap amyloid engineering | npj Biofilms and Microbiomes – Nature.com"},"content":{"rendered":"

Shanmugam, N. et al. Microbial functional amyloids serve diverse purposes for structure, adhesion and defence. Biophys. Rev. 11, 287302 (2019).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Taglialegna, A., Lasa, I. & Valle, J. Amyloid structures as biofilm matrix scaffolds. J. Bacteriol. 198, 25792588 (2016).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Yarawsky, A. E., Johns, S. L., Schuck, P. & Herr, A. B. The biofilm adhesion protein Aap from Staphylococcus epidermidis forms zinc-dependent amyloid fibers. J. Biol. Chem. 295, 44114427 (2020).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Besingi, R. N. et al. Functional amyloids in Streptococcus mutans, their use as targets of biofilm inhibition and initial characterization of SMU_63c. Microbiol. (Read., Engl.) 163, 488501 (2017).<\/p>\n

Article CAS Google Scholar <\/p>\n

Oli, M. W. et al. Functional amyloid formation by Streptococcus mutans. Microbiology 158, 29032916 (2012).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Lembr, P., Di Martino, Patrick & Vendrely, C. Amyloid peptides derived from CsgA and FapC modify the viscoelastic properties of biofilm model matrices. Biofouling 30, 415426 (2014).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Schwartz, K., Ganesan, M., Payne, D. E., Solomon, M. J. & Boles, B. R. Extracellular DNA facilitates the formation of functional amyloids in Staphylococcus aureus biofilms. Mol. Microbiol 99, 123134 (2016).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Seker, U. O. S., Chen, A. Y., Citorik, R. J. & Lu, T. K. Synthetic biogenesis of bacterial amyloid nanomaterials with tunable inorganic-organic interfaces and electrical conductivity. ACS Synth. Biol. 6, 266275 (2017).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Huang, J. et al. Programmable and printable Bacillus subtilis biofilms as engineered living materials. Nat. Chem. Biol. 15, 3441 (2019).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Chen, A. Y. et al. Synthesis and patterning of tunable multiscale materials with engineered cells. Nat. Mater. 13, 515523 (2014).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Nguyen, P. Q., Botyanszki, Z., Tay, P. K. R. & Joshi, N. S. Programmable biofilm-based materials from engineered curli nanofibres. Nat. Commun. 5, 4945 (2014).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Nguyen, P. Q. Synthetic biology engineering of biofilms as nanomaterials factories. Biochem. Soc. Trans. 45, 585597 (2017).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Hammer, N. D. et al. The C-terminal repeating units of CsgB direct bacterial functional amyloid nucleation. J. Mol. Biol. 422, 376389 (2012).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Van Gerven, N., Klein, R. D., Hultgren, S. J. & Remaut, H. Bacterial amyloid formation: structural insights into Curli Biogensis. Trends Microbiol. 23, 693706 (2015).<\/p>\n

PubMed PubMed Central Article CAS Google Scholar <\/p>\n

Hammar, M., Arnqvist, A., Bian, Z., Olsen, A. & Normark, S. Expression of two csg operons is required for production of fibronectin- and congo red-binding curli polymers in Escherichia coli K-12. Mol. Microbiol. 18, 661670 (1995).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Tay, P. K. R., Nguyen, P. Q. & Joshi, N. S. A synthetic circuit for mercury bioremediation using self-assembling functional amyloids. ACS Synth. Biol. 6, 18411850 (2017).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Lv, J. et al. Force spectra of single bacterial amyloid CsgA nanofibers. RSC Adv. 10, 2198621992 (2020).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Duraj-Thatte, A. M., Praveschotinunt, P., Nash, T. R., Ward, F. R. & Joshi, N. S. Modulating bacterial and gut mucosal interactions with engineered biofilm matrix proteins. Sci. Rep. 22, 3475 (2018).<\/p>\n

Article CAS Google Scholar <\/p>\n

Van Gerven, N. et al. Secretion and functional display of fusion proteins through the curli biogenesis pathway. Mol. Microbiol. 91, 10221035 (2014).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Botyanszki, Z., Tay, P. K. R., Nguyen, P. Q., Nussbaumer, M. G. & Joshi, N. S. Engineered catalytic biofilms: Site-specific enzyme immobilization onto E. coli curli nanofibers. Biotechnol. Bioeng. 112, 20162024 (2015).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Zakeri, B. et al. Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin. Proc. Natl Acad. Sci. USA 109, E690E697 (2012).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Gallus, S. et al. Surface display of complex enzymes by in situ SpyCatcher-SpyTag interaction. Chembiochem 21, 21262131 (2020).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Cucarella, C. et al. Bap, a Staphylococcus aureus surface protein involved in biofilm formation. J. Bacteriol. 183, 28882896 (2001).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Lasa, I. & Penads, J. R. Bap: a family of surface proteins involved in biofilm formation. Res Microbiol 157, 99107 (2006).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Tormo, M. A., Knecht, E., Gtz, F., Lasa, I. & Penads, J. R. Bap-dependent biofilm formation by pathogenic species of Staphylococcus: evidence of horizontal gene transfer? Microbiol. (Read., Engl.) 151, 24652475 (2005).<\/p>\n

CAS Article Google Scholar <\/p>\n

Taglialegna, A. et al. Staphylococcal Bap proteins build amyloid scaffold biofilm matrices in response to environmental signals. PLoS Pathog. 12, e1005711 (2016).<\/p>\n

PubMed PubMed Central Article CAS Google Scholar <\/p>\n

Arrizubieta, M. J., Toledo-Arana, A., Amorena, B., Penads, J. R. & Lasa, I. Calcium inhibits bap-dependent multicellular behavior in Staphylococcus aureus. J. Bacteriol. 186, 74907498 (2004).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Ma, J. et al. Structural mechanism for modulation of functional amyloid and biofilm formation by Staphylococcal Bap protein switch. EMBO J. 15, e107500 (2021).<\/p>\n

Google Scholar <\/p>\n

Taglialegna, A. et al. The biofilm-associated surface protein Esp of Enterococcus faecalis forms amyloid-like fibers. NPJ Biofilms Microbiomes 6, 1512 (2020).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Lembr, P., Vendrely, C. & Di Martino, Patrick Identification of an amyloidogenic peptide from the Bap protein of Staphylococcus epidermidis. Protein Pept. Lett. 21, 7579 (2014).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Valle, J., Fang, X. & Lasa, I. Revisiting Bap multidomain protein: more than sticking bacteria together. Front Microbiol 11, 74907499 (2020).<\/p>\n

Article Google Scholar <\/p>\n

Mukherjee, M. & Cao, B. Engineering controllable biofilms for biotechnological applications. Micro. Biotechnol. 14, 7478 (2021).<\/p>\n

Article Google Scholar <\/p>\n

Reichhardt, C. et al. Congo Red interactions with rurli-producing E. coli and native curli amyloid fibers. PLoS ONE 10, e0140388 (2015).<\/p>\n

PubMed PubMed Central Article CAS Google Scholar <\/p>\n

Ng, C. K. et al. Genetic engineering biofilms in situ using ultrasound-mediated DNA delivery. Micro. Biotechnol. 14, 15801593 (2021).<\/p>\n

CAS Article Google Scholar <\/p>\n

Zhang, C. et al. Engineered Bacillus subtilis biofilms as living glues. Mater. Today 28, 4048 (2019).<\/p>\n

Article Google Scholar <\/p>\n

Flemming, H.-C. & Wingender, J. The biofilm matrix. Nat. Rev. Micro 8, 623633 (2010).<\/p>\n

CAS Article Google Scholar <\/p>\n

Daz-Caballero, M., Navarro, S. & Ventura, S. Soluble assemblies in the fibrillation pathway of prion-inspired artificial functional amyloids are highly cytotoxic. Biomacromolecules 21, 23342345 (2020).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Vendrell-Fernndez, S., Lozano-Picazo, P., Cuadros-Snchez, P., Tejero-Ojeda, M. M. & Giraldo, R. Conversion of the OmpF Porin into a device to gather amyloids on the E. coli outer membrane. ACS Synth. Biol. 11, 655667 (2021).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Shu, Q. et al. The E. coli CsgB nucleator of curli assembles to -sheet oligomers that alter the CsgA fibrillization mechanism. Proc. Natl Acad. Sci. USA 109, 65026507 (2012).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Zhang, M., Shi, H., Zhang, X., Zhang, X. & Huang, Y. Cryo-EM structure of the nonameric CsgG-CsgF complex and its implications for controlling curli biogenesis in enterobacteriaceae. PLoS Biol. 18, e3000748 (2020).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Romero, D., Vlamakis, H., Losick, R. & Kolter, R. An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms. Mol. Microbiol. 80, 11551168 (2011).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Terra, R., Stanley-Wall, N. R., Cao, G. & Lazazzera, B. A. Identification of Bacillus subtilis SipW as a bifunctional signal peptidase that controls surface-adhered biofilm formation. J. Bacteriol. 194, 27812790 (2012).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Courchesne, N.-M. D., Duraj-Thatte, A., Tay, P. K. R., Nguyen, P. Q. & Joshi, N. S. Scalable production of genetically engineered nanofibrous macroscopic materials via filtration. ACS Biomater. Sci. Eng. 3, 733741 (2016).<\/p>\n

Article CAS Google Scholar <\/p>\n

Piero-Lambea, C., Ruano-Gallego, D. & Fernndez, L. A. Engineered bacteria as therapeutic agents. Curr. Opin. Biotechnol. 35, 94102 (2015).<\/p>\n

PubMed Article CAS Google Scholar <\/p>\n

Brune, K. D. et al. Plug-and-Display: decoration of Virus-Like Particles via isopeptide bonds for modular immunization. Sci. Rep. 6, 1923413 (2016).<\/p>\n

CAS PubMed PubMed Central Article Google Scholar <\/p>\n

Van Gerven, N., Van der Verren, S. E., Reiter, D. M. & Remaut, H. The role of functional amyloids in bacterial virulence. J. Mol. Biol. 430, 36573684 (2018).<\/p>\n

PubMed PubMed Central Article CAS Google Scholar <\/p>\n

Friedland, R. P. Mechanisms of molecular mimicry involving the microbiota in neurodegeneration. J. Alzheimers Dis. 45, 349362 (2015).<\/p>\n

CAS PubMed Article Google Scholar <\/p>\n

Sampson, T. R. et al. A gut bacterial amyloid promotes -synuclein aggregation and motor impairment in mice. eLife 9, 39619 (2020).<\/p>\n

Article Google Scholar <\/p>\n

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