{"id":254977,"date":"2013-02-16T14:48:16","date_gmt":"2013-02-16T19:48:16","guid":{"rendered":"http:\/\/www.eugenesis.com\/scientist-recommends-research-method-change-for-evolutionary-biology\/"},"modified":"2013-02-16T14:48:16","modified_gmt":"2013-02-16T19:48:16","slug":"scientist-recommends-research-method-change-for-evolutionary-biology","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/biology\/scientist-recommends-research-method-change-for-evolutionary-biology.php","title":{"rendered":"Scientist Recommends Research Method Change For Evolutionary Biology"},"content":{"rendered":"<p><p>    April Flowers for redOrbit.com  Your    Universe Online  <\/p>\n<p>    Shozo Yokoyama, a biologist at Emory University, says evolutionary    biologists need to shift their focus from present-day molecules    to synthesized, ancestral ones to truly understand the    mechanisms of natural selection.  <\/p>\n<p>    Yokoyama presented evidence to support his claim at the    American Academy of Arts and Sciences (AAAS) meeting in    Boston this week.  <\/p>\n<p>    This is not just an evolutionary biology problem, its a    science problem, says Yokoyama, a leading expert in the    natural selection of color vision. If you want to understand    the mechanisms of an adaptive phenotype, the function of a gene    and how that function changes, you have to look back in time.    That is the secret. Studying ancestral molecules will give us a    better understanding of genes that could be applied to medicine    and other areas of science.  <\/p>\n<p>    Yokoyama notes positive Darwinian selection has been studied    for years almost exclusively using comparative sequence    analysis of present-day molecules, an approach fueled by    increasingly fast and cheap genome sequencing techniques. Faster and    easier, says Yokoyama, are not always best if you want to    arrive at a true, quantitative result.  <\/p>\n<p>    If you only study present-day molecules, youre only getting    part of the picture, and that picture is often wrong, he says.  <\/p>\n<p>    Studying fish and other vertebrates, Yokoyama has spent two    decades teasing out secrets of the adaptive evolution of    vision.  <\/p>\n<p>    There are five classes of opsin genes that encode visual    pigments. They are also responsible for dim-light and color    vision. Since the available light at various ocean depths is    well quantified, fish provide valuable clues for how    environmental factors can lead to vision changes. For example,    the common vertebrate ancestor possessed ultraviolet vision,    suited to both shallow water and land.  <\/p>\n<p>    As the environment of a species sinks deeper in the ocean, or    rises closer to the surface and moves to land, bits and pieces    of the opsin genes change and vision adapts, Yokoyama says.    Im interested in exactly how that happens at the molecular    level.  <\/p>\n<p>    Molecular biologists construct a specific visual pigment by    taking DNA from an animal, isolating and cloning its    opsin genes, then using in vitro assays to create the pigment    that can then be manipulated by changing the positions of the    amino acids. This allows the scientists to study the regulation    of the genes functions.  <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Visit link:<br \/>\n<a target=\"_blank\" href=\"http:\/\/www.redorbit.com\/news\/science\/1112785523\/genetics-evolutionary-biology-synthesized-molecules-opsin-gene-021613\/\" title=\"Scientist Recommends Research Method Change For Evolutionary Biology\">Scientist Recommends Research Method Change For Evolutionary Biology<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> April Flowers for redOrbit.com Your Universe Online Shozo Yokoyama, a biologist at Emory University, says evolutionary biologists need to shift their focus from present-day molecules to synthesized, ancestral ones to truly understand the mechanisms of natural selection. Yokoyama presented evidence to support his claim at the American Academy of Arts and Sciences (AAAS) meeting in Boston this week.  <a href=\"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/biology\/scientist-recommends-research-method-change-for-evolutionary-biology.php\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":57,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"limit_modified_date":"","last_modified_date":"","_lmt_disableupdate":"","_lmt_disable":"","footnotes":""},"categories":[577690],"tags":[],"class_list":["post-254977","post","type-post","status-publish","format-standard","hentry","category-biology"],"modified_by":null,"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/254977"}],"collection":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/users\/57"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/comments?post=254977"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/254977\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/media?parent=254977"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/categories?post=254977"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/tags?post=254977"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}