{"id":243736,"date":"2013-05-31T06:44:31","date_gmt":"2013-05-31T10:44:31","guid":{"rendered":"http:\/\/www.eugenesis.com\/rapid-identification-and-strain-typing-of-salmonella-in-food-using-genome-sequence-scanning-technology\/"},"modified":"2013-05-31T06:44:31","modified_gmt":"2013-05-31T10:44:31","slug":"rapid-identification-and-strain-typing-of-salmonella-in-food-using-genome-sequence-scanning-technology","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/microbiology\/rapid-identification-and-strain-typing-of-salmonella-in-food-using-genome-sequence-scanning-technology.php","title":{"rendered":"Rapid Identification and Strain Typing of Salmonella in Food Using Genome Sequence Scanning Technology"},"content":{"rendered":"<p><p>    Woburn, MA (PRWEB) May 30, 2013  <\/p>\n<p>    PathoGenetix, Inc., a commercial-stage developer of an    automated system for rapid bacterial identification, has    announced new research demonstrating the use of Genome Sequence    Scanning (GSS) technology to confirm and identify pathogenic    Salmonella strains in enriched spinach samples in less than    five hours. The study findings were detailed in a poster presented last week at    the General Meeting of the American Society for Microbiology in    Denver.  <\/p>\n<p>    The results demonstrate the ability of GSS to shorten the time for pathogen    subtyping and serotype determination from an enriched food    sample, and to quickly derive additional strain and    serotype information from the numerous pathogen screening tests    commonly used in the food industry. Because GSS isolates and    scans microbial DNA directly from a mixed culture and does not    require a pure culture isolate, it greatly reduces the time,    complexity, skill and cost required by other molecular and    whole genome identification approaches. As a result, GSS can    enable quicker decisions affecting food safety and public    health. The GSS technology will be commercially available in    2014 in the RESOLUTION Microbial Genotyping    System.  <\/p>\n<p>    The research spiked ten common Salmonella strains in leafy    spinach greens including multiple serotypes of Typhimurium and    Enteritidis, as well as the Javiana, Newport, Montevideo and    Heidelberg serotypes. The test samples modeled    presumptive-positive enriched food samples like those that    would result from a pathogen screening test indicating the    presence of Salmonella. Additional non-Salmonella bacteria were    added to half of the test samples to evaluate the technologys    ability to identify and strain type Salmonella in the presence    of competing background microorganisms.  <\/p>\n<p>    Of the 120 samples spiked with Salmonella, GSS positively    identified the correct Salmonella serotype in 116 of the    samples. (Salmonella was not detected in four samples, due to    poor growth of Salmonella in the enrichment of the initial    sample, not related to the GSS technology.) The strain type    information provided by GSS was comparable to pulsed field gel    electrophoresis (PFGE), the current standard for pathogen    typing in foodborne outbreak investigation and response. No    false positives were recorded from the 12 control samples that    had not been spiked with Salmonella.  <\/p>\n<p>    According to the 2011 Estimates for Foodborne Illness    from the Centers for Disease Control and Prevention (CDC),    Salmonella is the second most common pathogen contributing to    domestically acquired foodborne illnesses, causing well over    one million illnesses (1,027,561) each year. It tops the list    in number of hospitalizations and deaths, and is responsible    for an estimated 19,336 hospitalizations (35%) and 378 deaths    (28%) each year.  <\/p>\n<p>    Other research presented by PathoGenetix at ASM showed that GSS    also can be used to reliably differentiate and strain type    pathogenic E. coli, including the most frequently isolated STEC    (Shiga toxin-producing E. coli) serotypes from both sporadic    cases and multiple foodborne illness outbreaks.  <\/p>\n<p>    About PathoGenetix, Inc.    PathoGenetix, Inc. is a commercial-stage developer of an    automated system for rapid bacterial identification from    complex samples. PathoGenetix is a venture-backed company that    has received more than $50 million in technology development    funding from the Department of Homeland Security. The core GSS    technology isolates and analyzes DNA directly from an enriched    biological samplewithout the need for a cultured isolateand    provides results in just five hours, days faster than current    methods. GSS has broad applicability in food safety, industrial    microbiology, and clinical diagnostics and research. The first    commercial GSS system will be available in 2014 for use in food    safety testing and foodborne illness outbreak investigations.    Learn more at <a href=\"http:\/\/www.pathogenetix.com\" rel=\"nofollow\">http:\/\/www.pathogenetix.com<\/a>.  <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Visit link:<br \/>\n<a target=\"_blank\" href=\"http:\/\/www.prweb.com\/releases\/salmonella\/strain_typing\/prweb10780909.htm\" title=\"Rapid Identification and Strain Typing of Salmonella in Food Using Genome Sequence Scanning Technology\">Rapid Identification and Strain Typing of Salmonella in Food Using Genome Sequence Scanning Technology<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> Woburn, MA (PRWEB) May 30, 2013 PathoGenetix, Inc., a commercial-stage developer of an automated system for rapid bacterial identification, has announced new research demonstrating the use of Genome Sequence Scanning (GSS) technology to confirm and identify pathogenic Salmonella strains in enriched spinach samples in less than five hours. The study findings were detailed in a poster presented last week at the General Meeting of the American Society for Microbiology in Denver. The results demonstrate the ability of GSS to shorten the time for pathogen subtyping and serotype determination from an enriched food sample, and to quickly derive additional strain and serotype information from the numerous pathogen screening tests commonly used in the food industry <a href=\"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/microbiology\/rapid-identification-and-strain-typing-of-salmonella-in-food-using-genome-sequence-scanning-technology.php\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":57,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"limit_modified_date":"","last_modified_date":"","_lmt_disableupdate":"","_lmt_disable":"","footnotes":""},"categories":[577473],"tags":[],"class_list":["post-243736","post","type-post","status-publish","format-standard","hentry","category-microbiology"],"modified_by":null,"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/243736"}],"collection":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/users\/57"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/comments?post=243736"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/243736\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/media?parent=243736"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/categories?post=243736"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/tags?post=243736"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}