{"id":232307,"date":"2017-08-04T12:46:21","date_gmt":"2017-08-04T16:46:21","guid":{"rendered":"http:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/uncategorized\/a-blueprint-for-genetically-engineering-a-super-coral-smithsonian.php"},"modified":"2017-08-04T12:46:21","modified_gmt":"2017-08-04T16:46:21","slug":"a-blueprint-for-genetically-engineering-a-super-coral-smithsonian","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/genetic-engineering\/a-blueprint-for-genetically-engineering-a-super-coral-smithsonian.php","title":{"rendered":"A Blueprint for Genetically Engineering a Super Coral &#8211; Smithsonian"},"content":{"rendered":"<p><p>  In a healthy reef, coral symbionts make food for the coral  animal.<\/p>\n<p>    A coral reef takes thousands of years to build, yet can    vanish in an instant.  <\/p>\n<p>    The culprit is usuallycoral    bleaching, a disease exacerbated by warming    watersthat today threatens reefs around the globe.    The     worst recorded bleaching eventstruck the South    Pacific between 2014 and 2016, when rising ocean temperatures    followed by a sudden influx of warm El Nio waters    traumatizedthe Great Barrier    Reef.In just one seasonbleaching    decimated nearly a quarter of thevast ecosystem, which    once sprawled nearly 150,000 square miles through the Coral    Sea.  <\/p>\n<p>    As awful as it was, that bleaching event was a wake-up call,    says Rachel    Levin, a molecular biologist who     recently proposed a bold technique to save these key    ecosystems. Her idea, published in the journal Frontiers in    Microbiology, is simple:Rather than finding healthy    symbiontsto repopulate bleached coral in nature, engineer    them in the lab instead.Given that this would    requiretampering with nature in a significant way, the    proposal is likely to stir controversial waters.  <\/p>\n<p>    But Levin argues that with time running out for reefs    worldwide, the potential value could wellbe worth the    risk.  <\/p>\n<p>    Levin studied cancer pharmacology as an undergraduate,    but became fascinated by the threats facing aquatic life while    dabbling in marine science courses. She was struck by the fact    that, unlike in human disease research, there were far fewer    researchers fighting to restore ocean health. After she    graduated, she moved from California to Sydney, Australia to    pursue a Ph.D. at the Center for Marine    Bio-Innovation in the University of New South Wales,    with the hope of applying her expertise in human disease    research to corals.  <\/p>\n<p>    In medicine, it often takes the threat of a serious    disease for researchers to try a new and controversial    treatment (i.e. merging two womens healthy eggs with one mans    sperm to make a     three-parent baby).The same holds in    environmental scienceto an extent.Like a    terrible disease [in] humans, when people realize how dire the    situation is becoming researchers start trying to propose much    more, Levin says.When it comes to saving    the environment, however, there are fewer advocates willing to    implementrisky, groundbreaking techniques.  <\/p>\n<p>    When it comes to reefscrucial marine regions that harbor an    astonishing amount of diversity as well as protect land    massesfrom storm surges, floods and erosionthat    hesitation could be fatal.  <\/p>\n<p>    Coral bleachingis often presented as the death of    coral, which is a little misleading. Actually, its the    breakdown of the symbiotic union that enables a coral to    thrive. The coral animal itself is like a building developer    who constructs the scaffolding of a high rise apartment    complex. The developer rents out each of the billions of rooms    to single-celled, photosynthetic microbes called    Symbiodinium.  <\/p>\n<p>    But in this case, in exchange for a safe place to live,    Symbiodinium makes food for the coral using    photosynthesis. A bleached coral, by contrast, is like a    deserted building. With no tenants to make their meals, the    coral eventually dies.    <\/p>\n<p>    Though bleaching can be deadly, its actually a clever    evolutionary strategy of the coral. The Symbiodinium    are expected to uphold their end of the bargain. But when the    water gets too warm, they stop photosynthesizing. When that    food goes scarce, the coral sends an eviction notice. Its    like having a bad tenantyoure going to get rid of what you    have and see if you can find better, Levin says.  <\/p>\n<p>    But as the oceans continue to warm, its harder and harder to    find good tenants. That means evictions can be risky. In a    warming ocean, the coral animal might die before it can find    any better rentersa scenario that has decimated reef    ecosystems around the planet.  <\/p>\n<p>    Levin wanted to solve this problem,by creatinga    straightforward recipe for building a super-symbiont that could    repopulate bleached corals and help them to persist through    climate changeessentially, the perfect tenants. But she had to    start small. At the time, there were so many holes and gaps    that prevented us from going forward, she says. All I wanted    to do was show that we could genetically engineer    [Symbiodinium].  <\/p>\n<p>    Even that would prove to be a tall order. The first challenge    was that, despite being a single-celled organism,    Symbiodinium has an unwieldy genome. Usually symbiotic    organisms have streamlined genomes, since they rely on their    hosts for most of their needs. Yet while other species have    genomes of around 2 million base    pairs, Symbiodiniums genome is 3 orders of    magnitude larger.  <\/p>\n<p>    Theyre humongous, Levin says. In fact, the entire human    genome is only slightly less than 3 times as big as    Symbiodiniums.  <\/p>\n<p>    Even after     advances in DNA sequencing made deciphering these genomes    possible, scientists still had no idea what 80 percent of the    genes were for. We needed to backtrack and piece together    which gene was doing what in this organism, Levin says. A    member of a group of phytoplankton called dinoflagellates,    Symbiodinium are     incredibly diverse. Levin turned her attention to two key    Symbiodinium strains she could grow in her lab.  <\/p>\n<p>    The first strain, like most Symbiodinium, was    vulnerable to the high temperatures that cause coral bleaching.    Turn up the heat dial a few notches, and this critter was    toast. But the other strain, which had been isolated from the    rare corals that live in the     warmest environments,seemed to be impervious to heat.    If she could figure out how these two strains wielded their    genes during bleaching conditions, then she might find the    genetic keys to engineering a new super-strain.  <\/p>\n<p>    When Levin turned up the heat, she saw that the    hardySymbiodinium escalated its production of    antioxidants and heat shock proteins, which help repair    cellular damage caused by heat. Unsurprisingly, the normal    Symbiodinium didnt. Levin then turned her attention    to figuring out a way to insert more copies of these crucial    heat tolerating genes into the weaker Symbiodinium,    thereby creating a strain adapted to live with corals from    temperate regionsbut with the tools to survive warming    oceans.  <\/p>\n<p>    Getting new DNA into a dinoflagellate cell is no easy task.    While tiny, these cells are protected by armored    plates, two cell membranes, and a cell wall. You can get    through if you push hard enough, Levin says. But then again,    you might end up killing the cells. So Levin solicited help    from an unlikely collaborator: a virus. After all, viruses    have evolved to be able to put their genes into their hosts    genomethats how they survive and reproduce, she says.  <\/p>\n<p>    Levin     isolated a virus that infected Symbiodinium, and    molecularly altered it it so that it no longer killed the    cells. Instead, she engineered it to be a benign delivery    system for those heat tolerating genes. In her paper, Levin    argues that the viruss payload could use     CRISPR, the breakthrough gene editing technique that relies    on a natural process used by bacteria, to cut and paste those    extra genes into a region of the Symbiodiniums genome    where they would be highly expressed.  <\/p>\n<p>    It sounds straightforward enough. But messing with a living    ecosystem is never simple, says says Dustin    Kemp, professor of biology at the University of Alabama at    Birmingham who studies the ecological impacts of climate change    on coral reefs. Im very much in favor of these solutions to    conserve and genetically help, says Kemp. But rebuilding    reefs that have taken thousands of years to form is going to be    a very daunting task.  <\/p>\n<p>    Considering the staggering diversity of the    Symbiodinium strains that live within just one coral    species, even if there was a robust system for genetic    modification, Kemp wonders if it would ever be possible to    engineer enough different super-Symbiodinium to    restore that diversity. If you clear cut an old growth forest    and then go out and plant a few pine trees, is that really    saving or rebuilding the forest? asks Kemp, who was not    involved with the study.  <\/p>\n<p>    But Kemp agrees that reefs are dying at an alarming rate, too    fast for the natural evolution of Symbiodinium to keep    up. If corals were rapidly evolving to handle [warming    waters], youd think we would have seen it by now, he    says.  <\/p>\n<p>        Thomas Mock, a marine microbiologist at the University of    East Anglia in the UKand a pioneer in genetically    modifying phytoplankton, also points out that dinoflagellate    biology is still largely enshrouded in mystery. To me this is    messing around, he says. But this is how it starts usually.    Provocative argument is always goodits very very challenging,    but lets get started somewhere and see what we can achieve.    Recently, CSIRO, the Australian governments science division,    has announced that it will fund laboratories to continue    researching genetic modifications in coral symbionts.  <\/p>\n<p>    When it comes to human healthfor instance, protecting humans    from devastating diseases like malaria or Zikascientists have    been willing to try more drastic techniques, such as     releasing mosquitoes genetically programmed to pass on    lethal genes. The genetic modifications needed to save corals,    Levin argues, would not be nearly as extreme. She adds that    much more controlled lab testing is required before genetically    modified Symbiodinium could be released into the    environment to repopulate dying corals reefs.  <\/p>\n<p>    When were talking genetically engineered, were not    significantly altering these species, she says. Were not    making hugely mutant things. All were trying to do is give    them an extra copy of a gene they already have to help them out    ... were not trying to be crazy scientists.  <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Read the rest here:<\/p>\n<p><a target=\"_blank\" href=\"http:\/\/www.smithsonianmag.com\/science-nature\/blueprint-engineering-super-coral-180964309\/\" title=\"A Blueprint for Genetically Engineering a Super Coral - Smithsonian\">A Blueprint for Genetically Engineering a Super Coral - Smithsonian<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> In a healthy reef, coral symbionts make food for the coral animal.  <a href=\"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/genetic-engineering\/a-blueprint-for-genetically-engineering-a-super-coral-smithsonian.php\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"limit_modified_date":"","last_modified_date":"","_lmt_disableupdate":"","_lmt_disable":"","footnotes":""},"categories":[3],"tags":[],"class_list":["post-232307","post","type-post","status-publish","format-standard","hentry","category-genetic-engineering"],"modified_by":null,"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/232307"}],"collection":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/comments?post=232307"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/232307\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/media?parent=232307"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/categories?post=232307"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/tags?post=232307"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}