{"id":182010,"date":"2015-02-09T10:09:06","date_gmt":"2015-02-09T15:09:06","guid":{"rendered":"http:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/uncategorized\/sdsc-biology-workbench-san-diego-supercomputer-center.php"},"modified":"2015-02-09T10:09:06","modified_gmt":"2015-02-09T15:09:06","slug":"sdsc-biology-workbench-san-diego-supercomputer-center","status":"publish","type":"post","link":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/super-computer\/sdsc-biology-workbench-san-diego-supercomputer-center.php","title":{"rendered":"SDSC Biology Workbench &#8211; San Diego Supercomputer Center"},"content":{"rendered":"<p><p>    The Biology WorkBench is a web-based tool for    biologists. The WorkBench allows biologists to search many    popular protein and nucleic acid sequence databases. Database    searching is integrated with access to a wide variety of    analysis and modeling tools, all within a point and click    interface that eliminates file format compatibility problems.  <\/p>\n<p>    First time users: please register for a free    account.  <\/p>\n<p>    Forgotten Pasword: we've noticed that most people that    forget their password are actually using the incorrect user    name. Our user names are case sensitive, so \"JohnDoe\",    \"johndoe\", and \"JOHNDOE\" are all different names. If you still    cannot log in, there are two ways you can get at your old data,    once we verify you own the account in question. One option is    for you to register for a new user name, and we can transfer    the data from your old account to your new account once you    mail us your old and new user names. The other option is for us    to remove the password to your old account, which allows you to    register for it again - your old data should show up once you    log in again. Please mail <a href=\"mailto:bwbhelp@sdsc.edu\">bwbhelp@sdsc.edu<\/a> and let us know    which option you prefer.  <\/p>\n<p>    The Biology Student    Workbench group at the University of Illinois National    Center for Supercomputing Applications has developed a number    of lessons which use the Biology Workbench, as well as a        How To tutorial. Also, we have written a Frequently Asked Questions document for our    users, and a list of recent updates. If these documents do not help you    with your problem, please send a message to <a href=\"mailto:bwbhelp@sdsc.edu\">bwbhelp@sdsc.edu<\/a> .  <\/p>\n<p>    Suggested Web Browser: the Biology Workbench was    originally developed for Netscape Communicator or Navigator, up    through version 4.7x. Microsoft Internet Explorer (especially    older versions) can be unpredictable when loading the Biology    Workbench, but the latest versions of Explorer seem to work    fine. Because we are unable to force Internet Explorer to open    seconary windows with our software, showing database records    and reading help pages can be a bit clumsy. Nonetheless, most    Biology Workbench operations *should* work within Internet    Explorer, Firefox, or other popular browsers.  <\/p>\n<p>    Some people notice browser-related problems that go away when    one clears the disk cache, and turning off the disk cache    altogether when using the Biology Workbench might be a good    idea. Also, your memory cache should be set as high as    comfortable, as some of our pages can take up quite a bit of    space in your browser. We suggest a minimum value of 10    megabytes for your memory cache, if possible.  <\/p>\n<p>    Structure Viewing: PDB structures can be viewed for    PDBFinder records that are returned from a database search. One    way to do this is to use the Rasmol    program. The Chime plugin is another    option for viewing structures on Windows and Macintosh    machines, and we may eventually provide a Java-based structure    viewer. For molecules with PDB structures, we also provide    links to the PDB Structure Explorer page for that    particule molecule, and to the Protein Explorer display    for that particule molecule.  <\/p>\n<p>    For more information on the research group that developed the    Biology Workbench, please visit the home page for the Bioinformatics    and Computational Biology group in the Deparment of Bioengineering at    University of California, San    Diego.  <\/p>\n<p><!-- Auto Generated --><\/p>\n<p>Read the rest here:<\/p>\n<p><a target=\"_blank\" href=\"http:\/\/workbench.sdsc.edu\/\" title=\"SDSC Biology Workbench - San Diego Supercomputer Center\">SDSC Biology Workbench - San Diego Supercomputer Center<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p> The Biology WorkBench is a web-based tool for biologists. The WorkBench allows biologists to search many popular protein and nucleic acid sequence databases <a href=\"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/super-computer\/sdsc-biology-workbench-san-diego-supercomputer-center.php\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"limit_modified_date":"","last_modified_date":"","_lmt_disableupdate":"","_lmt_disable":"","footnotes":""},"categories":[41],"tags":[],"class_list":["post-182010","post","type-post","status-publish","format-standard","hentry","category-super-computer"],"modified_by":null,"_links":{"self":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/182010"}],"collection":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/comments?post=182010"}],"version-history":[{"count":0,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/posts\/182010\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/media?parent=182010"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/categories?post=182010"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.euvolution.com\/futurist-transhuman-news-blog\/wp-json\/wp\/v2\/tags?post=182010"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}